1 %define packname annaffy
3 Summary: Annotation tools for Affymetrix biological metadata
8 Group: Applications/Engineering
9 Source0: http://bioconductor.org/packages/release/bioc/src/contrib/%{packname}_%{version}.tar.gz
10 # Source0-md5: 706772d7ae0b91168fbf826172af773c
11 URL: http://bioconductor.org/packages/release/bioc/html/%{packname}.html
13 BuildRequires: R-Biobase
14 BuildRequires: R-GO.db
15 BuildRequires: R-KEGG.db
16 BuildRequires: R-AnnotationDbi
17 BuildRequires: R-hgu95av2.db
18 BuildRequires: R-multtest,
19 BuildRequires: texlive-latex
20 BuildRequires: zlib-devel
25 Requires: R-AnnotationDbi
26 Suggests: R-hgu95av2.db
28 BuildRoot: %{tmpdir}/%{name}-%{version}-root-%(id -u -n)
31 Functions for handling data from Bioconductor Affymetrix annotation
32 data packages. Produces compact HTML and text reports including
33 experimental data and URL links to many online databases. Allows
34 searching biological metadata using various criteria.
37 %setup -q -c -n %{packname}
42 rm -rf $RPM_BUILD_ROOT
43 install -d $RPM_BUILD_ROOT%{_libdir}/R/library
45 R CMD INSTALL %{packname} -l $RPM_BUILD_ROOT%{_libdir}/R/library
48 rm -rf $RPM_BUILD_ROOT
51 %defattr(644,root,root,755)
52 %dir %{_libdir}/R/library/%{packname}
53 %doc %{_libdir}/R/library/%{packname}/doc
54 %doc %{_libdir}/R/library/%{packname}/html
55 %doc %{_libdir}/R/library/%{packname}/DESCRIPTION
56 %{_libdir}/R/library/%{packname}/INDEX
57 %{_libdir}/R/library/%{packname}/NAMESPACE
58 %{_libdir}/R/library/%{packname}/Meta
59 %{_libdir}/R/library/%{packname}/R
60 %{_libdir}/R/library/%{packname}/help
61 %{_libdir}/R/library/%{packname}/data