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2b370910 JR |
1 | %define packname annaffy |
2 | ||
3 | Summary: Annotation tools for Affymetrix biological metadata | |
4 | Name: R-%{packname} | |
5 | Version: 1.30.0 | |
6 | Release: 1 | |
7 | License: LGPL v2+ | |
8 | Group: Applications/Engineering | |
9 | Source0: http://bioconductor.org/packages/release/bioc/src/contrib/%{packname}_%{version}.tar.gz | |
10 | # Source0-md5: 706772d7ae0b91168fbf826172af773c | |
11 | URL: http://bioconductor.org/packages/release/bioc/html/%{packname}.html | |
12 | BuildRequires: R | |
13 | BuildRequires: R-Biobase | |
14 | BuildRequires: R-GO.db | |
15 | BuildRequires: R-KEGG.db | |
16 | BuildRequires: R-AnnotationDbi | |
17 | BuildRequires: R-hgu95av2.db | |
18 | BuildRequires: R-multtest, | |
19 | BuildRequires: texlive-latex | |
20 | BuildRequires: zlib-devel | |
21 | Requires: R | |
22 | Requires: R-Biobase | |
23 | Requires: R-GO.db | |
24 | Requires: R-KEGG.db | |
25 | Requires: R-AnnotationDbi | |
26 | Suggests: R-hgu95av2.db | |
27 | Suggests: R-multtest, | |
28 | BuildRoot: %{tmpdir}/%{name}-%{version}-root-%(id -u -n) | |
29 | ||
30 | %description | |
31 | Functions for handling data from Bioconductor Affymetrix annotation | |
32 | data packages. Produces compact HTML and text reports including | |
33 | experimental data and URL links to many online databases. Allows | |
34 | searching biological metadata using various criteria. | |
35 | ||
36 | %prep | |
37 | %setup -q -c -n %{packname} | |
38 | ||
39 | %build | |
40 | ||
41 | %install | |
42 | rm -rf $RPM_BUILD_ROOT | |
43 | install -d $RPM_BUILD_ROOT%{_libdir}/R/library | |
44 | ||
45 | R CMD INSTALL %{packname} -l $RPM_BUILD_ROOT%{_libdir}/R/library | |
46 | ||
47 | %clean | |
48 | rm -rf $RPM_BUILD_ROOT | |
49 | ||
50 | %files | |
51 | %defattr(644,root,root,755) | |
52 | %dir %{_libdir}/R/library/%{packname} | |
53 | %doc %{_libdir}/R/library/%{packname}/doc | |
54 | %doc %{_libdir}/R/library/%{packname}/html | |
55 | %doc %{_libdir}/R/library/%{packname}/DESCRIPTION | |
56 | %{_libdir}/R/library/%{packname}/INDEX | |
57 | %{_libdir}/R/library/%{packname}/NAMESPACE | |
58 | %{_libdir}/R/library/%{packname}/Meta | |
59 | %{_libdir}/R/library/%{packname}/R | |
60 | %{_libdir}/R/library/%{packname}/help | |
61 | %{_libdir}/R/library/%{packname}/data |