- new, based on fedora

diff --git a/R-Biostrings.spec b/R-Biostrings.spec
new file mode 100644 (file)
index 0000000..04cbf39
--- /dev/null
+++ b/R-Biostrings.spec
@@ -0,0 +1,67 @@
+%define                packname        Biostrings
+
+Summary:       String objects representing biological sequences
+Name:          R-%{packname}
+Version:       2.26.2
+Release:       1
+License:       Artistic 2.0
+Group:         Applications/Engineering
+Source0:       http://bioconductor.org/packages/release/bioc/src/contrib/%{packname}_%{version}.tar.gz
+# Source0-md5: a15baec03008e4c7c6f605a14ddd46af
+URL:           http://bioconductor.org/packages/release/bioc/html/Biostrings.html
+BuildRequires: R
+BuildRequires: R-Biobase
+BuildRequires: R-IRanges-devel >= 1.6.6
+BuildRequires: texlive-latex
+Requires:      R
+Requires:      R-Biobase
+Requires:      R-IRanges >= 1.6.6
+BuildRoot:     %{tmpdir}/%{name}-%{version}-root-%(id -u -n)
+
+%description
+Memory efficient string containers, string matching algorithms, and
+other utilities, for fast manipulation of large biological sequences
+or set of sequences.
+
+%package        devel
+Summary:       Development files for %{name}
+Group:         Development/Libraries
+Requires:      %{name} = %{version}-%{release}
+
+%description    devel
+The %{name}-devel package contains libraries and header files for
+developing applications that use %{name}.
+
+%prep
+%setup -q -c -n %{packname}
+
+%build
+
+%install
+rm -rf $RPM_BUILD_ROOT
+install -d $RPM_BUILD_ROOT%{_libdir}/R/library
+
+R CMD INSTALL %{packname} -l $RPM_BUILD_ROOT%{_libdir}/R/library
+
+%clean
+rm -rf $RPM_BUILD_ROOT
+
+%files
+%defattr(644,root,root,755)
+%dir %{_libdir}/R/library/%{packname}/
+%doc %{_libdir}/R/library/%{packname}/doc
+%doc %{_libdir}/R/library/%{packname}/DESCRIPTION
+%doc %{_libdir}/R/library/%{packname}/html
+%doc %{_libdir}/R/library/%{packname}/NEWS
+%{_libdir}/R/library/%{packname}/help
+%{_libdir}/R/library/%{packname}/R
+%{_libdir}/R/library/%{packname}/extdata
+%{_libdir}/R/library/%{packname}/data
+%{_libdir}/R/library/%{packname}/libs
+%{_libdir}/R/library/%{packname}/Meta
+%{_libdir}/R/library/%{packname}/UnitTests
+%{_libdir}/R/library/%{packname}/INDEX
+%{_libdir}/R/library/%{packname}/NAMESPACE
+
+%files devel
+%{_libdir}/R/library/%{packname}/include