R-Biostrings.spec

   1 %define         packname        Biostrings
   2
   3 Summary:        String objects representing biological sequences
   4 Name:           R-%{packname}
   5 Version:        2.30.1
   6 Release:        1
   7 License:        Artistic 2.0
   8 Group:          Applications/Engineering
   9 Source0:        http://bioconductor.org/packages/release/bioc/src/contrib/%{packname}_%{version}.tar.gz
  10 # Source0-md5:  acf4d4047855f20096e751cf5fadbf5e
  11 URL:            http://bioconductor.org/packages/release/bioc/html/Biostrings.html
  12 BuildRequires:  R
  13 BuildRequires:  R-Biobase
  14 BuildRequires:  R-IRanges-devel >= 1.6.6
  15 BuildRequires:  texlive-latex
  16 Requires:       R
  17 Requires:       R-Biobase
  18 Requires:       R-IRanges >= 1.6.6
  19 BuildRoot:      %{tmpdir}/%{name}-%{version}-root-%(id -u -n)
  20
  21 %description
  22 Memory efficient string containers, string matching algorithms, and
  23 other utilities, for fast manipulation of large biological sequences
  24 or set of sequences.
  25
  26 %package        devel
  27 Summary:        Development files for %{name}
  28 Group:          Development/Libraries
  29 Requires:       %{name} = %{version}-%{release}
  30
  31 %description    devel
  32 The %{name}-devel package contains libraries and header files for
  33 developing applications that use %{name}.
  34
  35 %prep
  36 %setup -q -c -n %{packname}
  37
  38 %build
  39
  40 %install
  41 rm -rf $RPM_BUILD_ROOT
  42 install -d $RPM_BUILD_ROOT%{_libdir}/R/library
  43
  44 R CMD INSTALL %{packname} -l $RPM_BUILD_ROOT%{_libdir}/R/library
  45
  46 %clean
  47 rm -rf $RPM_BUILD_ROOT
  48
  49 %files
  50 %defattr(644,root,root,755)
  51 %dir %{_libdir}/R/library/%{packname}/
  52 %doc %{_libdir}/R/library/%{packname}/doc
  53 %doc %{_libdir}/R/library/%{packname}/DESCRIPTION
  54 %doc %{_libdir}/R/library/%{packname}/html
  55 %doc %{_libdir}/R/library/%{packname}/NEWS
  56 %{_libdir}/R/library/%{packname}/help
  57 %{_libdir}/R/library/%{packname}/R
  58 %{_libdir}/R/library/%{packname}/extdata
  59 %{_libdir}/R/library/%{packname}/data
  60 %{_libdir}/R/library/%{packname}/libs
  61 %{_libdir}/R/library/%{packname}/Meta
  62 %{_libdir}/R/library/%{packname}/UnitTests
  63 %{_libdir}/R/library/%{packname}/INDEX
  64 %{_libdir}/R/library/%{packname}/NAMESPACE
  65
  66 %files devel
  67 %{_libdir}/R/library/%{packname}/include