R-Biobase.spec

   1 %define         packname        Biobase
   2
   3 Summary:        Base functions for Bioconductor
   4 Name:           R-%{packname}
   5 Version:        2.18.0
   6 Release:        1
   7 License:        Artistic 2.0
   8 Group:          Applications/Science
   9 Source0:        http://bioconductor.org/packages/release/bioc/src/contrib/%{packname}_%{version}.tar.gz
  10 # Source0-md5:  257ffbd8d658368656a1b6778fa38268
  11 URL:            http://bioconductor.org/packages/release/bioc/html/Biobase.html
  12 BuildRequires:  R
  13 BuildRequires:  R-BiocGenerics >= 0.3.2
  14 BuildRequires:  texlive-latex
  15 Requires:       R
  16 Requires:       R-BiocGenerics >= 0.3.2
  17 BuildRoot:      %{tmpdir}/%{name}-%{version}-root-%(id -u -n)
  18
  19 %description
  20 Base functions for Bioconductor (bioconductor.org). Biobase provides
  21 functions that are needed by many other Bioconductor packages or which
  22 replace R functions.
  23
  24 %prep
  25 %setup -c -q -n %{packname}
  26
  27 %build
  28
  29 %install
  30 rm -rf $RPM_BUILD_ROOT
  31 install -d $RPM_BUILD_ROOT%{_libdir}/R/library
  32
  33 %{_bindir}/R CMD INSTALL -l $RPM_BUILD_ROOT%{_libdir}/R/library %{packname}
  34
  35 %clean
  36 rm -rf $RPM_BUILD_ROOT
  37
  38 %files
  39 %defattr(644,root,root,755)
  40 %dir %{_libdir}/R/library/%{packname}
  41 %{_libdir}/R/library/%{packname}/INDEX
  42 %{_libdir}/R/library/%{packname}/Meta/
  43 %{_libdir}/R/library/%{packname}/R/
  44 %{_libdir}/R/library/%{packname}/help/
  45 %{_libdir}/R/library/%{packname}/libs/
  46 %{_libdir}/R/library/%{packname}/NAMESPACE
  47 %{_libdir}/R/library/%{packname}/UnitTests/
  48 %{_libdir}/R/library/%{packname}/data
  49 %{_libdir}/R/library/%{packname}/scripts
  50 %{_libdir}/R/library/%{packname}/ExpressionSet
  51 %{_libdir}/R/library/%{packname}/CITATION
  52 %{_libdir}/R/library/%{packname}/Code
  53 %{_libdir}/R/library/%{packname}/extdata
  54 %{_libdir}/R/library/%{packname}/testClass.R
  55 %{_libdir}/R/library/%{packname}/NEWS
  56 %doc %{_libdir}/R/library/%{packname}/doc
  57 %doc %{_libdir}/R/library/%{packname}/DESCRIPTION
  58 %doc %{_libdir}/R/library/%{packname}/html