]> git.pld-linux.org Git - packages/R-cummeRbund.git/commitdiff
- new master auto/th/R-cummeRbund-2.4.0-1
authorJan Rękorajski <baggins@pld-linux.org>
Fri, 29 Nov 2013 12:16:43 +0000 (13:16 +0100)
committerJan Rękorajski <baggins@pld-linux.org>
Fri, 29 Nov 2013 12:16:43 +0000 (13:16 +0100)
R-cummeRbund.spec [new file with mode: 0644]

diff --git a/R-cummeRbund.spec b/R-cummeRbund.spec
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+%define                packname        cummeRbund
+
+Summary:       Analysis, exploration, manipulation, and visualization of Cufflinks high-throughput sequencing data
+Name:          R-%{packname}
+Version:       2.4.0
+Release:       1
+License:       LGPL v2+
+Group:         Applications/Engineering
+Source0:       http://bioconductor.org/packages/release/bioc/src/contrib/%{packname}_%{version}.tar.gz
+# Source0-md5: f6236638b8305fd6ac7c58bd5f9bb89d
+URL:           http://bioconductor.org/packages/release/bioc/html/cummeRbund.html
+BuildRequires: R
+BuildRequires: R-BiocGenerics >= 0.3.2
+BuildRequires: R-Gviz
+BuildRequires: R-cran-fastcluster
+BuildRequires: R-cran-ggplot2
+BuildRequires: R-cran-plyr
+BuildRequires: R-cran-reshape2
+BuildRequires: R-cran-RSQLite
+BuildRequires: R-rtracklayer
+BuildRequires: texlive-latex
+Requires:      R
+Requires:      R-BiocGenerics >= 0.3.2
+Requires:      R-Gviz
+Requires:      R-cran-fastcluster
+Requires:      R-cran-ggplot2
+Requires:      R-cran-plyr
+Requires:      R-cran-reshape2
+Requires:      R-cran-RSQLite
+Requires:      R-rtracklayer
+BuildRoot:     %{tmpdir}/%{name}-%{version}-root-%(id -u -n)
+
+%description
+Allows for persistent storage, access, exploration, and manipulation
+of Cufflinks high-throughput sequencing data. In addition, provides
+numerous plotting functions for commonly used visualizations.
+
+%prep
+%setup -q -c -n %{packname}
+
+%build
+
+%install
+rm -rf $RPM_BUILD_ROOT
+install -d $RPM_BUILD_ROOT%{_libdir}/R/library
+
+R CMD INSTALL %{packname} -l $RPM_BUILD_ROOT%{_libdir}/R/library
+
+%clean
+rm -rf $RPM_BUILD_ROOT
+
+%files
+%defattr(644,root,root,755)
+%dir %{_libdir}/R/library/%{packname}
+%doc %{_libdir}/R/library/%{packname}/doc
+%doc %{_libdir}/R/library/%{packname}/html
+%doc %{_libdir}/R/library/%{packname}/DESCRIPTION
+%doc %{_libdir}/R/library/%{packname}/NEWS
+%{_libdir}/R/library/%{packname}/INDEX
+%{_libdir}/R/library/%{packname}/NAMESPACE
+%{_libdir}/R/library/%{packname}/Meta
+%{_libdir}/R/library/%{packname}/R
+%{_libdir}/R/library/%{packname}/help
+%{_libdir}/R/library/%{packname}/data
+%{_libdir}/R/library/%{packname}/extdata
+%{_libdir}/R/library/%{packname}/reports
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