]> git.pld-linux.org Git - packages/R-affxparser.git/commitdiff
- initial revision master auto/th/R-affxparser-1.34.0-1
authorJan Rękorajski <baggins@pld-linux.org>
Tue, 26 Nov 2013 13:38:08 +0000 (14:38 +0100)
committerJan Rękorajski <baggins@pld-linux.org>
Tue, 26 Nov 2013 13:38:08 +0000 (14:38 +0100)
R-affxparser.spec [new file with mode: 0644]

diff --git a/R-affxparser.spec b/R-affxparser.spec
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+%define                packname        affxparser
+
+Summary:       Affymetrix File Parsing SDK
+Name:          R-%{packname}
+Version:       1.34.0
+Release:       1
+License:       LGPL v2+
+Group:         Applications/Engineering
+Source0:       http://bioconductor.org/packages/release/bioc/src/contrib/%{packname}_%{version}.tar.gz
+# Source0-md5: dbcd64c4d496799d932af88b54eb3881
+URL:           http://bioconductor.org/packages/release/bioc/html/affxparser.html
+BuildRequires: R
+BuildRequires: texlive-latex
+Requires:      R
+BuildRoot:     %{tmpdir}/%{name}-%{version}-root-%(id -u -n)
+
+%description
+Package for parsing Affymetrix files (CDF, CEL, CHP, BPMAP, BAR).
+It provides methods for fast and memory efficient parsing of
+Affymetrix files using the Affymetrix' Fusion SDK. Both ASCII- and
+binary-based files are supported. Currently, there are methods for
+reading chip definition file (CDF) and a cell intensity file (CEL).
+These files can be read either in full or in part. For example,
+probe signals from a few probesets can be extracted very quickly
+from a set of CEL files into a convenient list structure.
+
+%prep
+%setup -q -c -n %{packname}
+
+%build
+
+%install
+rm -rf $RPM_BUILD_ROOT
+install -d $RPM_BUILD_ROOT%{_libdir}/R/library
+
+R CMD INSTALL %{packname} -l $RPM_BUILD_ROOT%{_libdir}/R/library
+
+%clean
+rm -rf $RPM_BUILD_ROOT
+
+%files
+%defattr(644,root,root,755)
+%dir %{_libdir}/R/library/%{packname}
+%doc %{_libdir}/R/library/%{packname}/html
+%doc %{_libdir}/R/library/%{packname}/DESCRIPTION
+%doc %{_libdir}/R/library/%{packname}/NEWS
+%{_libdir}/R/library/%{packname}/INDEX
+%{_libdir}/R/library/%{packname}/NAMESPACE
+%{_libdir}/R/library/%{packname}/Meta
+%{_libdir}/R/library/%{packname}/R
+%{_libdir}/R/library/%{packname}/help
+%{_libdir}/R/library/%{packname}/libs
+%{_libdir}/R/library/%{packname}/extras
+%{_libdir}/R/library/%{packname}/info
+%{_libdir}/R/library/%{packname}/testscripts
+
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