R-IRanges.spec

   1 %define         packname        IRanges
   2
   3 Summary:        Low-level containers for storing sets of integer ranges
   4 Name:           R-%{packname}
   5 Version:        1.16.2
   6 Release:        1
   7 License:        Artistic 2.0
   8 Group:          Applications/Engineering
   9 Source0:        http://bioconductor.org/packages/release/bioc/src/contrib/%{packname}_%{version}.tar.gz
  10 # Source0-md5:  15a84d7a62a29eec96f57da1c2db7629
  11 URL:            http://bioconductor.org/packages/release/bioc/html/IRanges.html
  12 BuildRequires:  R-BiocGenerics
  13 BuildRequires:  R
  14 BuildRequires:  texlive-latex
  15 Requires:       R-BiocGenerics
  16 Requires:       R
  17 BuildRoot:      %{tmpdir}/%{name}-%{version}-root-%(id -u -n)
  18
  19 %description
  20 The IRanges class and its extensions are low-level containers for
  21 storing sets of integer ranges. A typical use of these containers in
  22 biology is for representing a set of chromosome regions. More specific
  23 extensions of the IRanges class will typically allow the storage of
  24 additional information attached to each chromosome region as well as a
  25 hierarchical relationship between these regions.
  26
  27 %package        devel
  28 Summary:        Development files for %{name}
  29 Group:          Development/Libraries
  30 Requires:       %{name} = %{version}-%{release}
  31
  32 %description    devel
  33 The %{name}-devel package contains libraries and header files for
  34 developing applications that use %{name}.
  35
  36 %prep
  37 %setup -q -c -n %{packname}
  38
  39 %build
  40
  41 %install
  42 rm -rf $RPM_BUILD_ROOT
  43 install -d $RPM_BUILD_ROOT%{_libdir}/R/library
  44
  45 R CMD INSTALL %{packname} -l $RPM_BUILD_ROOT%{_libdir}/R/library
  46
  47 %clean
  48 rm -rf $RPM_BUILD_ROOT
  49
  50 %files
  51 %defattr(644,root,root,755)
  52 %dir %{_libdir}/R/library/%{packname}/
  53 %doc %{_libdir}/R/library/%{packname}/doc
  54 %doc %{_libdir}/R/library/%{packname}/html
  55 %doc %{_libdir}/R/library/%{packname}/DESCRIPTION
  56 %doc %{_libdir}/R/library/%{packname}/NEWS
  57 %{_libdir}/R/library/%{packname}/INDEX
  58 %{_libdir}/R/library/%{packname}/NAMESPACE
  59 %{_libdir}/R/library/%{packname}/extdata
  60 %{_libdir}/R/library/%{packname}/Meta
  61 %{_libdir}/R/library/%{packname}/help
  62 %{_libdir}/R/library/%{packname}/R
  63 %{_libdir}/R/library/%{packname}/libs
  64 %{_libdir}/R/library/%{packname}/unitTests
  65
  66 %files devel
  67 %defattr(644,root,root,755)
  68 %{_libdir}/R/library/%{packname}/include