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0699c71c JR |
1 | %define packname BSgenome |
2 | ||
3 | Summary: Infrastructure for Biostrings-based genome data packages | |
4 | Name: R-%{packname} | |
5 | Version: 1.26.1 | |
6 | Release: 1 | |
7 | License: Artistic 2.0 | |
8 | Group: Applications/Science | |
9 | Source0: http://bioconductor.org/packages/release/bioc/src/contrib/%{packname}_%{version}.tar.gz | |
10 | # Source0-md5: c46bfe6388f351c7ee7a034e63fd784d | |
11 | URL: http://bioconductor.org/packages/release/bioc/html/Biobase.html | |
12 | BuildRequires: R | |
13 | BuildRequires: R-BiocGenerics >= 0.3.2 | |
14 | BuildRequires: R-IRanges >= 1.13.6 | |
15 | BuildRequires: R-GenomicRanges >= 1.7.5 | |
16 | BuildRequires: R-Biostrings >= 2.23.3 | |
17 | BuildRequires: texlive-latex | |
18 | Requires: R | |
19 | Requires: R-BiocGenerics >= 0.3.2 | |
20 | Requires: R-IRanges >= 1.13.6 | |
21 | Requires: R-GenomicRanges >= 1.7.5 | |
22 | Requires: R-Biostrings >= 2.23.3 | |
23 | BuildRoot: %{tmpdir}/%{name}-%{version}-root-%(id -u -n) | |
24 | ||
25 | %description | |
26 | Infrastructure shared by all the Biostrings-based genome data packages. | |
27 | ||
28 | %prep | |
29 | %setup -c -q -n %{packname} | |
30 | ||
31 | %build | |
32 | ||
33 | %install | |
34 | rm -rf $RPM_BUILD_ROOT | |
35 | install -d $RPM_BUILD_ROOT%{_libdir}/R/library | |
36 | ||
37 | %{_bindir}/R CMD INSTALL -l $RPM_BUILD_ROOT%{_libdir}/R/library %{packname} | |
38 | ||
39 | %clean | |
40 | rm -rf $RPM_BUILD_ROOT | |
41 | ||
42 | %files | |
43 | %defattr(644,root,root,755) | |
44 | %dir %{_libdir}/R/library/%{packname} | |
45 | %{_libdir}/R/library/%{packname}/INDEX | |
46 | %{_libdir}/R/library/%{packname}/Meta/ | |
47 | %{_libdir}/R/library/%{packname}/R/ | |
48 | %{_libdir}/R/library/%{packname}/help/ | |
49 | %{_libdir}/R/library/%{packname}/libs/ | |
50 | %{_libdir}/R/library/%{packname}/NAMESPACE | |
51 | %{_libdir}/R/library/%{packname}/UnitTests/ | |
52 | %{_libdir}/R/library/%{packname}/data | |
53 | %{_libdir}/R/library/%{packname}/scripts | |
54 | %{_libdir}/R/library/%{packname}/ExpressionSet | |
55 | %{_libdir}/R/library/%{packname}/CITATION | |
56 | %{_libdir}/R/library/%{packname}/Code | |
57 | %{_libdir}/R/library/%{packname}/extdata | |
58 | %{_libdir}/R/library/%{packname}/testClass.R | |
59 | %{_libdir}/R/library/%{packname}/NEWS | |
60 | %doc %{_libdir}/R/library/%{packname}/doc | |
61 | %doc %{_libdir}/R/library/%{packname}/DESCRIPTION | |
62 | %doc %{_libdir}/R/library/%{packname}/html |