R-XVector.spec

   1 %define         packname        XVector
   2
   3 Summary:        Representation and manpulation of external sequences
   4 Name:           R-%{packname}
   5 Version:        0.2.0
   6 Release:        2
   7 License:        Artistic 2.0
   8 Group:          Applications/Math
   9 Source0:        http://www.bioconductor.org/packages/release/bioc/src/contrib/%{packname}_%{version}.tar.gz
  10 # Source0-md5:  d5c6799b09b67f1fa5942ed6d60e5452
  11 URL:            http://www.bioconductor.org/packages/release/bioc/html/XVector.html
  12 BuildRequires:  R
  13 BuildRequires:  R-BiocGenerics
  14 BuildRequires:  R-IRanges-devel >= 1.19.36
  15 BuildRequires:  texlive-latex
  16 Requires:       R
  17 Requires:       R-BiocGenerics
  18 Requires:       R-IRanges >= 1.19.36
  19 BuildRoot:      %{tmpdir}/%{name}-%{version}-root-%(id -u -n)
  20
  21 %description
  22 Memory efficient S4 classes for storing sequences "externally"
  23 (behind an R external pointer, or on disk).
  24
  25 %package        devel
  26 Summary:        Development files for %{name}
  27 Group:          Development/Libraries
  28 Requires:       %{name} = %{version}-%{release}
  29
  30 %description    devel
  31 The %{name}-devel package contains libraries and header files for
  32 developing applications that use %{name}.
  33
  34 %prep
  35 %setup -q -c -n %{packname}
  36
  37 %build
  38 # circular dep on R-Rsamtools
  39 #{_bindir}/R CMD build %{packname}
  40
  41 %install
  42 rm -rf $RPM_BUILD_ROOT
  43 install -d $RPM_BUILD_ROOT%{_libdir}/R/library
  44
  45 %{_bindir}/R CMD INSTALL -l $RPM_BUILD_ROOT%{_libdir}/R/library %{packname}
  46
  47 %clean
  48 rm -rf $RPM_BUILD_ROOT
  49
  50 %files
  51 %defattr(644,root,root,755)
  52 %dir %{_libdir}/R/library/%{packname}/
  53 %doc %{_libdir}/R/library/%{packname}/html/
  54 %doc %{_libdir}/R/library/%{packname}/DESCRIPTION
  55 %{_libdir}/R/library/%{packname}/INDEX
  56 %{_libdir}/R/library/%{packname}/NAMESPACE
  57 %{_libdir}/R/library/%{packname}/Meta/
  58 %{_libdir}/R/library/%{packname}/R/
  59 %{_libdir}/R/library/%{packname}/help/
  60 %{_libdir}/R/library/%{packname}/unitTests/
  61 %{_libdir}/R/library/%{packname}/libs/
  62
  63 %files devel
  64 %defattr(644,root,root,755)
  65 %{_libdir}/R/library/%{packname}/include