-diff -ur avogadro-1.0.3/CMakeLists.txt avogadro-1.0.3-mkspecs-dir/CMakeLists.txt
---- avogadro-1.0.3/CMakeLists.txt 2011-04-25 07:29:58.000000000 +0200
-+++ avogadro-1.0.3-mkspecs-dir/CMakeLists.txt 2011-04-27 02:42:26.000000000 +0200
-@@ -95,8 +95,6 @@
+diff -urNp -x '*.orig' avogadro-1.2.0.org/CMakeLists.txt avogadro-1.2.0/CMakeLists.txt
+--- avogadro-1.2.0.org/CMakeLists.txt 2016-06-08 16:19:45.000000000 +0200
++++ avogadro-1.2.0/CMakeLists.txt 2021-08-17 17:23:31.247260410 +0200
+@@ -95,8 +95,6 @@ if (CMAKE_COMPILER_IS_GNUCXX)
if(NOT APPLE) # Mac GCC42 compiler has bug
check_cxx_compiler_flag(-fvisibility=hidden HAVE_GCC_VISIBILITY)
set(HAVE_GCC_VISIBILITY ${HAVE_GCC_VISIBILITY} CACHE BOOL "GCC support for hidden visibility")
set(_GCC_COMPILED_WITH_BAD_ALLOCATOR FALSE)
if (GCC_IS_NEWER_THAN_4_1)
exec_program(${CMAKE_C_COMPILER} ARGS -v OUTPUT_VARIABLE _gcc_alloc_info)
-@@ -98,7 +98,7 @@
- endif (NOT APPLE)
+@@ -114,7 +112,7 @@ if (CMAKE_COMPILER_IS_GNUCXX)
+ endif()
# Set up additional build flags for particular build types. These will be added to CMAKE_CXX_FLAGS,
# they will not replace them.
- set(CMAKE_CXX_FLAGS_RELEASE "-O2 -DNDEBUG -DQT_NO_DEBUG_OUTPUT -Wl,-s")
set(CMAKE_CXX_FLAGS_RELWITHDEBINFO
"${CMAKE_CXX_FLAGS_RELWITHDEBINFO} ${CMAKE_CXX_FLAGS_WARN}")
set(CMAKE_CXX_FLAGS_DEBUG "-g3 -fno-inline ${CMAKE_CXX_FLAGS_WARN}")
-@@ -491,7 +491,7 @@
- if(QT_MKSPECS_DIR AND INSTALL_QMAKE_PRF)
+@@ -552,7 +550,7 @@ if(QT_MKSPECS_DIR AND INSTALL_QMAKE_PRF)
+ # )
install(FILES
"${CMAKE_CURRENT_BINARY_DIR}/avogadro.prf"
- DESTINATION "${CMAKE_INSTALL_PREFIX}/${QT_MKSPECS_RELATIVE}/features"
+ DESTINATION "${QT_MKSPECS_DIR}/features"
)
- else(QT_MKSPECS_DIR AND INSTALL_QMAKE_PRF)
- message(WARNING "Qt mkspecs directory not found. File 'avogadro.prf' will be installed to ${SHARE_INSTALL_PREFIX}/avogadro/qmake.")
-diff -ur avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/CMakeLists.txt avogadro-1.2.0.build/libavogadro/src/extensions/symmetry/libmsym/CMakeLists.txt
---- avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/CMakeLists.txt 2016-06-08 16:19:45.000000000 +0200
-+++ avogadro-1.2.0.build/libavogadro/src/extensions/symmetry/libmsym/CMakeLists.txt 2017-04-13 11:58:44.627114834 +0200
-@@ -38,6 +38,7 @@
+ # endif ("${QT_MKSPECS_DIR}" MATCHES ^$"${CMAKE_INSTALL_PREFIX}/")
+ else()
+diff -urNp -x '*.orig' avogadro-1.2.0.org/libavogadro/src/extensions/symmetry/libmsym/CMakeLists.txt avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/CMakeLists.txt
+--- avogadro-1.2.0.org/libavogadro/src/extensions/symmetry/libmsym/CMakeLists.txt 2016-06-08 16:19:45.000000000 +0200
++++ avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/CMakeLists.txt 2021-08-17 17:23:31.247260410 +0200
+@@ -38,6 +38,7 @@ set (CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -st
# C_STANDARD_REQUIRED ON)
set_target_properties(msym PROPERTIES PUBLIC_HEADER "src/msym.h;src/msym_error.h")