# TODO:
-# - add more contrib packages
-# - separate contrib packages to other specs
-# - (?) separate recomended packages to other specs (i'm not sure...)
# - move perl R libraries to standard perl location
#
# Conditional build:
Summary: A language for data analysis and graphics
Summary(pl): Jêzyk do analizy danych oraz grafiki
Name: R
-Version: 1.9.1
-Release: 4
+Version: 2.0.0
+Release: 0.1
License: Mixed (distributable), mostly GPL
Group: Development/Languages
# CRAN master site: ftp://cran.r-project.org/pub/R/src/
-Source0: ftp://stat.ethz.ch/R-CRAN/src/base/%{name}-%{version}.tgz
-# Source0-md5: c8201425506e5c077ef1936e19ea2f51
-Source1: ftp://stat.ethz.ch/R-CRAN/src/contrib/KernSmooth_2.22-13.tar.gz
-# Source1-md5: 15f5ab6094ea848f02b5109f40055128
-Source2: ftp://stat.ethz.ch/R-CRAN/src/contrib/VR_7.2-4.tar.gz
-# Source2-md5: 15882d679f7704597194ab4be40e1a62
-Source3: ftp://stat.ethz.ch/R-CRAN/src/contrib/acepack_1.3-2.1.tar.gz
-# Source3-md5: eb75cab587664b58df4a14c65f450b62
-Source4: ftp://stat.ethz.ch/R-CRAN/src/contrib/boot_1.2-17.tar.gz
-# Source4-md5: 88a0bc20efe532f30b0606b99394a3f4
-Source5: ftp://stat.ethz.ch/R-CRAN/src/contrib/bootstrap_1.0-12.tar.gz
-# Source5-md5: 6860c7d62ab95756267be774bcf60578
-Source6: ftp://stat.ethz.ch/R-CRAN/src/contrib/cluster_1.9.6.tar.gz
-# Source6-md5: 6baba1d66491f6c4fab70d9128df2ccd
-Source7: ftp://stat.ethz.ch/R-CRAN/src/contrib/date_1.2-18.tar.gz
-# Source7-md5: 8bb9d6bc5cb0b06e250be6f478cf4c2a
-Source8: ftp://stat.ethz.ch/R-CRAN/src/contrib/e1071_1.4-1.tar.gz
-# Source8-md5: 806fc46915d14640e6d01cfa590422e5
-Source9: ftp://stat.ethz.ch/R-CRAN/src/contrib/foreign_0.6-11.tar.gz
-# Source9-md5: 6ebc52bc959d27eff06e50b83818bf77
-Source10: ftp://stat.ethz.ch/R-CRAN/src/contrib/fracdiff_1.1-1.tar.gz
-# Source10-md5: e1f624b063789f21c74d85ebaeda60fa
-Source11: ftp://stat.ethz.ch/R-CRAN/src/contrib/gee_4.13-10.tar.gz
-# Source11-md5: 7f32a7f7b022dd366d27482a3561d2a6
-Source12: ftp://stat.ethz.ch/R-CRAN/src/contrib/lattice_0.9-16.tar.gz
-# Source12-md5: c98c91ccea8880c79d30aab4e2cca63b
-Source13: ftp://stat.ethz.ch/R-CRAN/src/contrib/leaps_2.7.tar.gz
-# Source13-md5: 551d8cd9a53d2eee7c13108577910a44
-Source14: ftp://stat.ethz.ch/R-CRAN/src/contrib/mgcv_1.0-9.tar.gz
-# Source14-md5: ba1585b777c886444d0470c8f831f983
-Source15: ftp://stat.ethz.ch/R-CRAN/src/contrib/mlbench_1.0-0.tar.gz
-# Source15-md5: 101108689bd005ef96641a8c33f17698
-Source16: ftp://stat.ethz.ch/R-CRAN/src/contrib/nlme_3.1-50.tar.gz
-# Source16-md5: 6d210f59cb96fda0e3b9644e6085da5a
-Source17: ftp://stat.ethz.ch/R-CRAN/src/contrib/oz_1.0-9.tar.gz
-# Source17-md5: 0eae69fafcabbe14dff81ff00ef3e4fa
-Source18: ftp://stat.ethz.ch/R-CRAN/src/contrib/polynom_1.1-15.tar.gz
-# Source18-md5: bc17210955f5a49834531ba1bdc1b0e9
-Source19: ftp://stat.ethz.ch/R-CRAN/src/contrib/princurve_1.1-6.tar.gz
-# Source19-md5: 8c36f2fef3265890f8393dac6d89fdc5
-Source20: ftp://stat.ethz.ch/R-CRAN/src/contrib/quadprog_1.4-7.tar.gz
-# Source20-md5: d93eb133e72e89de717c9db9d5f28d66
-Source21: ftp://stat.ethz.ch/R-CRAN/src/contrib/rpart_3.1-17.tar.gz
-# Source21-md5: 378fb531cac466b6abb774da00846e43
-Source22: ftp://stat.ethz.ch/R-CRAN/src/contrib/survival_2.13-1.tar.gz
-# Source22-md5: cae71a003c742e42675dbdd9b9da371f
-Source23: ftp://stat.ethz.ch/R-CRAN/src/contrib/xgobi_1.2-12.tar.gz
-# Source23-md5: 3edae689c69c12ef71df1ee269c1b1b8
-Source26: %{name}.desktop
+Source0: ftp://stat.ethz.ch/R-CRAN/src/base/R-2/%{name}-%{version}.tar.gz
+# Source0-md5: 3900bca37cabb4b76b8d736d51cc9251
+# Source0-size: 10676072
+Source1: %{name}.desktop
URL: http://www.r-project.org/
BuildRequires: XFree86-devel
BuildRequires: autoconf
BuildRequires: zip
BuildRequires: zlib >= 1.1.3
#BuildRequires: lpr
+#Requires: lpr
%{!?_without_gnome:BuildRequires: gnome-libs-devel}
%{!?_without_gnome:BuildRequires: ORBit-devel}
%{!?_without_gnome:BuildRequires: libglade-gnome-devel}
-Provides: R-base
-Provides: R-contrib
BuildRoot: %{tmpdir}/%{name}-%{version}-root-%(id -u -n)
%description
Group: Development/Languages
Requires(post): textutils
Requires(post): perl
-Provides: R-ctest R-eda R-lqs R-methods R-modreg R-mva R-nls R-splines
-Provides: R-stepfun R-tcltk R-tools R-ts R-grid
+Provides: R-base
+Provides: R-datasets
+Provides: R-grid
+Provides: R-graphics
+Provides: R-grDevices
+Provides: R-methods
+Provides: R-utils
+Provides: R-tcltk
+Provides: R-splines
+Provides: R-stats
+Provides: R-stats4
+Provides: R-tools
%description base
R is a language and run-time environment for carrying out interactive
Ten podpakiet R zawiera zestaw rzeczywistych danych i funkcji do
tworzenia sztucznych danych s³u¿±cych jako test wydajno¶ci metod
uczenia maszyny.
-
%prep
-%setup -q -c -n R-cran -T -b 1
-%setup -q -c -n R-cran -T -D -b 2
-%setup -q -c -n R-cran -T -D -b 3
-%setup -q -c -n R-cran -T -D -b 4
-%setup -q -c -n R-cran -T -D -b 5
-%setup -q -c -n R-cran -T -D -b 6
-%setup -q -c -n R-cran -T -D -b 7
-%setup -q -c -n R-cran -T -D -b 8
-%setup -q -c -n R-cran -T -D -b 9
-%setup -q -c -n R-cran -T -D -b 10
-%setup -q -c -n R-cran -T -D -b 11
-%setup -q -c -n R-cran -T -D -b 12
-%setup -q -c -n R-cran -T -D -b 13
-%setup -q -c -n R-cran -T -D -b 14
-%setup -q -c -n R-cran -T -D -b 15
-%setup -q -c -n R-cran -T -D -b 16
-%setup -q -c -n R-cran -T -D -b 17
-%setup -q -c -n R-cran -T -D -b 18
-%setup -q -c -n R-cran -T -D -b 19
-%setup -q -c -n R-cran -T -D -b 20
-%setup -q -c -n R-cran -T -D -b 21
-%setup -q -c -n R-cran -T -D -b 22
-%setup -q -c -n R-cran -T -D -b 23
%setup -q
-#%setup -q -T -D -a 14
# These files have the path for PERL hard-coded as /usr/local/bin/perl
# We need to remove them to avoid dependency problems
%configure \
%{!?_without_gnome:--with-gnome} \
%{?_without_gnome:--without-gnome} \
- --without-tcltk \
- --enable-R-shlib
+ --enable-R-shlib \
+ --enable-linux-lfs \
+ --with-zlib \
+ --with-bzlib \
+ --with-pcre \
+ --without-recommended-packages
%{__make}
+%{__make} check
+%{__make} docs
%{__make} help
%{__make} html
-%{__make} clean
-
-# Install contrib packages
-#
-R_HOME=`pwd`;export R_HOME
-PERL5LIB=`pwd`/share/perl;export PERL5LIB
-cd ../R-cran
-for pkg in `ls`
-do
-${R_HOME}/bin/INSTALL ${pkg}
-done
-cd ${R_HOME}
-
-#Remove old template files.
-#
-for oldinfile in `find . -name '*.in' -print`
-do
- mv ${oldinfile} ${oldinfile}.old
-# rm ${oldinfile}
-done
-
-# Gather documentation from contrib packages in one directory
-# Assume that anything not in one of the standard directories is
-# documentation, and copy it.
-#
-mkdir ${R_HOME}/contrib
-cd ${RPM_BUILD_DIR}/R-cran
-for pkg in `ls`; do
- if [ -d ${pkg} ]; then
- mkdir ${R_HOME}/${pkg}
- for docfile in `ls ${pkg}`; do
- case $docfile in
- INDEX) ;;
- TITLE) ;;
- R) ;;
- man) ;;
- src) ;;
- src-c) ;;
- data) ;;
- *) cp -R -P ${pkg}/${docfile} ${R_HOME};;
- esac
- done
- fi
-done
-cd ${R_HOME}
+%{__make} info
%install
rm -rf $RPM_BUILD_ROOT
install -d $RPM_BUILD_ROOT{%{_bindir},%{_mandir}/man1,%{_libdir}/R,%{_includedir},%{_desktopdir}}
-install %{SOURCE26} $RPM_BUILD_ROOT%{_desktopdir}
-
-cp doc/R.1 $RPM_BUILD_ROOT%{_mandir}/man1/
+%{__make} install \
+ rhome=$RPM_BUILD_ROOT%{_libdir}/R \
+ mandir=$RPM_BUILD_ROOT%{_mandir} \
+ bindir=$RPM_BUILD_ROOT%{_bindir} \
+
-cp -R AUTHORS afm bin doc etc library modules share \
- $RPM_BUILD_ROOT%{_libdir}/R
-sed "s,`pwd`,%{_libdir}/R,g" < bin/R > $RPM_BUILD_ROOT%{_libdir}/R/bin/R
-ln -sf %{_libdir}/R/bin/R $RPM_BUILD_ROOT%{_bindir}/R
+install %{SOURCE1} $RPM_BUILD_ROOT%{_desktopdir}
find $RPM_BUILD_ROOT%{_libdir}/R -name 'Makefile*' -exec rm -f {} \;
-rm -rf $RPM_BUILD_ROOT%{_libdir}/R/etc/*.old
-
-mv $RPM_BUILD_ROOT%{_libdir}/R/bin/libR*.so $RPM_BUILD_ROOT%{_libdir}
-
-cp -R include $RPM_BUILD_ROOT%{_includedir}/R
+mv $RPM_BUILD_ROOT%{_libdir}/R/lib/libR*.so $RPM_BUILD_ROOT%{_libdir}
+mv $RPM_BUILD_ROOT%{_libdir}/%{name}/include $RPM_BUILD_ROOT%{_includedir}/R
ln -sf %{_includedir}/R $RPM_BUILD_ROOT%{_libdir}/R/include
+rm $RPM_BUILD_ROOT%{_bindir}/%{name}
+sed -i -e "s#$RPM_BUILD_ROOT##g" $RPM_BUILD_ROOT%{_libdir}/%{name}/bin/%{name}
+ln -sf %{_libdir}/%{name}/bin/%{name} $RPM_BUILD_ROOT%{_bindir}/%{name}
%clean
rm -rf $RPM_BUILD_ROOT
-%triggerun -- R-base < 1.9.1-2
-if [ -d %{_libdir}/R/include -a ! -L %{_libdir}/R/include ]; then
- install -d %{_includedir}/R
- mv %{_libdir}/R/include/* %{_includedir}/R
- rm -rf %{_libdir}/R/include
- ln -sf %{_includedir}/R %{_libdir}/R/include
-fi
-
-%post base
+%post
(cd %{_libdir}/R/library; umask 022; cat */CONTENTS > ../doc/html/search/index.txt
R_HOME=%{_libdir}/R ../bin/Rcmd perl ../share/perl/build-help.pl --htmllist)
/sbin/ldconfig
-%postun base -p /sbin/ldconfig
-
-#%preun base
-## These files are not owned by any package, so we have to remove them
-## but only if this is the last version of R-base on the system.
-##
-#if [ "$1" = 0 ];
-#then
-# rm -f %{_libdir}/R/doc/html/search/index.txt
-# rm -f %{_libdir}/R/doc/html/packages.html
-#fi
-
-%post contrib
-(cd %{_libdir}/R/library; umask 022; cat */CONTENTS > ../doc/html/search/index.txt
- R_HOME=%{_libdir}/R ../bin/Rcmd perl ../share/perl/build-help.pl --htmllist)
-
-%postun contrib
-if [ -f ../bin/Rcmd ];then
-(cd %{_libdir}/R/library; umask 022; cat */CONTENTS > ../doc/html/search/index.txt
- R_HOME=%{_libdir}/R ../bin/Rcmd perl ../share/perl/build-help.pl --htmllist)
-fi
-
-%post recommended
-(cd %{_libdir}/R/library; umask 022; cat */CONTENTS > ../doc/html/search/index.txt
- R_HOME=%{_libdir}/R ../bin/Rcmd perl ../share/perl/build-help.pl --htmllist)
-
-%postun recommended
-if [ -f ../bin/Rcmd ];then
-(cd %{_libdir}/R/library; umask 022; cat */CONTENTS > ../doc/html/search/index.txt
- R_HOME=%{_libdir}/R ../bin/Rcmd perl ../share/perl/build-help.pl --htmllist)
-fi
-
-%post mlbench
-(cd %{_libdir}/R/library; umask 022; cat */CONTENTS > ../doc/html/search/index.txt
- R_HOME=%{_libdir}/R ../bin/Rcmd perl ../share/perl/build-help.pl --htmllist)
-
-%postun mlbench
-if [ -f ../bin/Rcmd ];then
-(cd %{_libdir}/R/library; umask 022; cat */CONTENTS > ../doc/html/search/index.txt
- R_HOME=%{_libdir}/R ../bin/Rcmd perl ../share/perl/build-help.pl --htmllist)
-fi
+%postun -p /sbin/ldconfig
%files base
%defattr(644,root,root,755)
+%doc COPYRIGHTS FAQ NEWS README RESOURCES THANKS Y2K
+
%{_mandir}/man1/R.1*
%attr(755,root,root) %{_bindir}/R
%dir %{_libdir}/R
%{_libdir}/R/share
%{_libdir}/R/AUTHORS
%dir %{_libdir}/R/library
-%{_libdir}/R/library/*.css
-%{_libdir}/R/library/base
-%{_libdir}/R/library/ctest
-%{_libdir}/R/library/eda
-%{_libdir}/R/library/grid
-%{_libdir}/R/library/graphics
-%{_libdir}/R/library/lqs
-%{_libdir}/R/library/methods
-%{_libdir}/R/library/mle
-%{_libdir}/R/library/modreg
-%{_libdir}/R/library/mva
-%{_libdir}/R/library/nls
-%{_libdir}/R/library/splines
-%{_libdir}/R/library/stats
-%{_libdir}/R/library/stats4
-%{_libdir}/R/library/stepfun
-%{_libdir}/R/library/tcltk
-%{_libdir}/R/library/tools
-%{_libdir}/R/library/ts
-%{_libdir}/R/library/utils
-%{_libdir}/R/modules
-%doc BUGS COPYRIGHTS FAQ NEWS README RESOURCES THANKS Y2K
# %{_libdir}/R/doc %except %{_libdir}/R/doc/html/{packages.html,search/index.txt}
%dir %{_libdir}/R/doc
%{_libdir}/R/doc/[KRm]*
%ghost %{_libdir}/R/doc/html/packages.html
%{_desktopdir}/*
-%files recommended
-%defattr(644,root,root,755)
-%{_libdir}/R/library/MASS
-%{_libdir}/R/library/class
-%{_libdir}/R/library/nnet
-%{_libdir}/R/library/spatial
-%doc VR
-%{_libdir}/R/library/KernSmooth
-%doc KernSmooth
-%{_libdir}/R/library/boot
-%doc boot
-%{_libdir}/R/library/cluster
-%doc cluster
-%{_libdir}/R/library/foreign
-%doc foreign
-%{_libdir}/R/library/lattice
-%doc lattice
-%{_libdir}/R/library/mgcv
-%doc mgcv
-%{_libdir}/R/library/nlme
-%doc nlme
-%{_libdir}/R/library/rpart
-%doc rpart
-%{_libdir}/R/library/survival
-%doc survival
-
-%files contrib
-%defattr(644,root,root,755)
-%{_libdir}/R/library/acepack
-%doc acepack
-%{_libdir}/R/library/bootstrap
-%doc bootstrap
-%{_libdir}/R/library/date
-%doc date
-%{_libdir}/R/library/e1071
-%doc e1071
-%{_libdir}/R/library/fracdiff
-%doc fracdiff
-%{_libdir}/R/library/gee
-%doc gee
-%{_libdir}/R/library/leaps
-%doc leaps
-%{_libdir}/R/library/oz
-%doc oz
-%{_libdir}/R/library/polynom
-%doc polynom
-%{_libdir}/R/library/princurve
-%doc princurve
-%{_libdir}/R/library/quadprog
-%doc quadprog
-%{_libdir}/R/library/xgobi
-%doc xgobi
-
-%files mlbench
-%defattr(644,root,root,755)
-%{_libdir}/R/library/mlbench
-%doc mlbench
+%attr(755,root,root) %{_libdir}/%{name}/modules
+
+%{_libdir}/%{name}/library/base
+%{_libdir}/%{name}/library/datasets
+%{_libdir}/%{name}/library/grid
+%{_libdir}/%{name}/library/graphics
+%{_libdir}/%{name}/library/grDevices
+%{_libdir}/%{name}/library/methods
+%{_libdir}/%{name}/library/utils
+%{_libdir}/%{name}/library/tcltk
+%{_libdir}/%{name}/library/splines
+%{_libdir}/%{name}/library/stats
+%{_libdir}/%{name}/library/stats4
+%{_libdir}/%{name}/library/tools