+#
+# Conditional build
+%bcond_without tcl # disable tcl support
+%bcond_without tests # do not run "make check"
+#
+# NOTE:
+# - /etc/localtime must be present for tests to work
+#
# TODO:
-# - move perl R libraries to standard perl location
+# - faulty build on i486 (test stats-Ex.R):
+# error in optim(init[mask], getLike, method = "L-BFGS-B", lower = rep(0, :
+# non-finite value supplied by optim
# - script for rpm to autoprovides/autorequires R internals
#
-# Conditional build:
-%bcond_without gnome # without GNOME support
-#
%include /usr/lib/rpm/macros.perl
Summary: A language for data analysis and graphics
-Summary(pl): Jêzyk do analizy danych oraz grafiki
+Summary(pl.UTF-8): Język do analizy danych oraz grafiki
Name: R
-Version: 2.2.1
-Release: 1
+Version: 2.11.0
+Release: 2
License: Mixed (distributable), mostly GPL
Group: Development/Languages
# CRAN master site: ftp://cran.r-project.org/pub/R/src/
Source0: ftp://stat.ethz.ch/R-CRAN/src/base/R-2/%{name}-%{version}.tar.gz
-# Source0-md5: 42542290c6d1585af7ded330f811385c
+# Source0-md5: c6c1e866299f533617750889c729bfb3
Source1: %{name}.desktop
URL: http://www.r-project.org/
-BuildRequires: XFree86-devel
BuildRequires: autoconf
BuildRequires: automake
BuildRequires: blas-devel
BuildRequires: bzip2-devel
+BuildRequires: cairo-devel
BuildRequires: gcc-c++
-BuildRequires: gcc-g77
+BuildRequires: gcc-fortran
BuildRequires: gettext-devel
+BuildRequires: lapack-devel >= 3.1.1-4
+BuildRequires: libicu-devel
BuildRequires: libjpeg-devel >= 6b
BuildRequires: libpng-devel >= 1.0.5
BuildRequires: libstdc++-devel
BuildRequires: libtool
-BuildRequires: libxml-devel
+BuildRequires: libxml2-devel >= 2.6.26
+BuildRequires: pango-devel
+BuildRequires: pcre-devel
BuildRequires: perl-base >= 1:5.6
+BuildRequires: pkgconfig
BuildRequires: readline-devel
BuildRequires: rpm-perlprov
-BuildRequires: tcl-devel
-BuildRequires: tetex-latex
+%{?with_tcl:BuildRequires: tcl-devel}
BuildRequires: tetex-dvips
+BuildRequires: tetex-latex
BuildRequires: tetex-pdftex
-BuildRequires: tk-devel
+%{?with_tcl:BuildRequires: tk-devel}
+BuildRequires: xorg-lib-libX11-devel
+BuildRequires: xorg-lib-libXmu-devel
+BuildRequires: xorg-lib-libXt-devel
+BuildRequires: xz-devel
BuildRequires: zip
-BuildRequires: zlib >= 1.1.3
-#BuildRequires: lpr
+BuildRequires: zlib-devel >= 1.1.3
#Requires: lpr
-%{?with_gnome:BuildRequires: gnome-libs-devel}
-%{?with_gnome:BuildRequires: ORBit-devel}
-%{?with_gnome:BuildRequires: libglade-gnome-devel}
+Requires(post): perl-base
+Requires(post): textutils
+Suggests: rkward
+Obsoletes: R-base
+Obsoletes: R-contrib
+Obsoletes: R-recommended
BuildRoot: %{tmpdir}/%{name}-%{version}-root-%(id -u -n)
%description
resulting language is very similar in appearance to S, the underlying
implementation and semantics are derived from Scheme.
-%description -l pl
-System do obliczeñ statystycznych i grafiki. R sk³ada siê z jêzyka
-oraz ¶rodowiska uruchomieniowego z grafik±, debuggerem, dostêpem do
-niektórych funkcji systemowych oraz mo¿liwo¶ci± uruchamiania programów
+%description -l pl.UTF-8
+System do obliczeń statystycznych i grafiki. R składa się z języka
+oraz środowiska uruchomieniowego z grafiką, debuggerem, dostępem do
+niektórych funkcji systemowych oraz możliwością uruchamiania programów
zapisanych w skryptach.
-Jêzyk R by³ zainspirowany dwoma istniej±cymi jêzykami: S (Beckera,
+Język R był zainspirowany dwoma istniejącymi językami: S (Beckera,
Chambersa i Wilksa) oraz Scheme (Sussmana). R jest podobny do S, ale
-implementacja i semantyka wywodzi siê ze Scheme.
-
-%package base
-Summary: The R base distribution
-Summary(pl): Podstawowa dystrybucja R
-License: GPL v2 / LGPL
-Group: Development/Languages
-Requires(post): textutils
-Requires(post): perl-base
-Provides: R-cran-base
-Provides: R-cran-datasets
-Provides: R-cran-grid
-Provides: R-cran-graphics
-Provides: R-cran-grDevices
-Provides: R-cran-methods
-Provides: R-cran-utils
-Provides: R-cran-tcltk
-Provides: R-cran-splines
-Provides: R-cran-stats
-Provides: R-cran-stats4
-Provides: R-cran-tools
-
-%description base
-R is a language and run-time environment for carrying out interactive
-statistical data analysis. It is not entirely dissimilar to the S
-language developed at AT&T Bell Laboratories (and now Lucent
-Technologies). Indeed, S users will find the environment quite
-familiar and a good deal of S software will run without change under
-R.
-
-%description base -l pl
-R jest jêzykiem i ¶rodowiskiem uruchomieniowym do interaktywnej
-analizy danych statystycznych. R nie jest ca³kowicie zgodny z jêzykiem
-S opracowanym w AT&T Bell Laboratiories (a teraz Lucent Technologies),
-mimo to u¿ytkownicy S zauwa¿± zbli¿one ¶rodowisko, a du¿a czê¶æ
-oprogramowania w S bêdzie dzia³a³a bez zmian w R.
-
-%package recommended
-Summary: Recommended contributed packages for the R language
-Summary(pl): Zalecane dodatkowe pakiety do jêzyka R
-Group: Development/Languages
-Requires: R-cran-KernSmooth
-Requires: R-cran-VR
-Requires: R-cran-boot
-Requires: R-cran-cluster
-Requires: R-cran-foreign
-Requires: R-cran-lattice
-Requires: R-cran-mgcv
-Requires: R-cran-nlme
-Requires: R-cran-rpart
-Requires: R-cran-survival
-License: GPL, free or free for non-commercial use
-URL: http://www.ci.tuwien.ac.at/R/
-Requires(post,postun): R-base
-Requires(post,postun): perl-base
-Requires(post,postun): textutils
-Obsoletes: R-contrib
-Requires: R-base = %{version}-%{release}
-
-%description recommended
-Packages which extend the capabilities of the R base distribution and
-are distributed on the Comprehensive R Archive Network (CRAN).
-
-%description recommended -l pl
-Pakiety rozszerzaj±ce mo¿liwo¶ci podstawowej dystrybucji jêzyka R,
-dystrubuowane w archiwum CRAN (Comprehensive R Archive Network).
+implementacja i semantyka wywodzi się ze Scheme.
%prep
%setup -q
-# These files have the path for Perl hard-coded as /usr/local/bin/perl
-# We need to remove them to avoid dependency problems
-rm -f ./doc/keyword-test.orig ./etc/undoc/R-funs.orig ./etc/undoc/extrExamp.orig
-
%build
%{__aclocal} -I m4
%{__autoconf}
-cp -f /usr/share/automake/config.* .
%configure \
- --with%{!?with_gnome:out}-gnome \
--enable-R-shlib \
--enable-linux-lfs \
- --with-zlib \
- --with-bzlib \
- --with-pcre \
- --without-recommended-packages
+ --with-system-zlib \
+ --with-system-bzlib \
+ --with-system-pcre \
+ --with-system-xz \
+ --with-libpng \
+ --with-jpeglib \
+ --with-blas \
+ --with-lapack \
+ --with-readline \
+ --with%{!?with_tcl:out}-tcltk \
+ --with-cairo \
+ --with-libpng \
+ --with-jpeglib \
+ --with-system-zlib \
+ --with-system-bzlib \
+ --with-system-pcre \
+ --with-iconv \
+ --with-ICU \
+ --with-x \
+ --with-recommended-packages
%{__make}
+%if %{with tests}
%{__make} check
-%{__make} docs
-%{__make} help
-%{__make} html
-%{__make} info
+%endif
+%{__make} docs pdf info
%install
rm -rf $RPM_BUILD_ROOT
install -d $RPM_BUILD_ROOT{%{_bindir},%{_mandir}/man1,%{_libdir}/R,%{_includedir},%{_desktopdir}}
+install -d $RPM_BUILD_ROOT%{perl_vendorlib}/{R,Text}
-%{__make} install \
- rhome=$RPM_BUILD_ROOT%{_libdir}/R \
- mandir=$RPM_BUILD_ROOT%{_mandir} \
- bindir=$RPM_BUILD_ROOT%{_bindir} \
-
+%{__make} -j1 install \
+ DESTDIR=$RPM_BUILD_ROOT
install %{SOURCE1} $RPM_BUILD_ROOT%{_desktopdir}
-find $RPM_BUILD_ROOT%{_libdir}/R -name 'Makefile*' -exec rm -f {} \;
mv $RPM_BUILD_ROOT%{_libdir}/R/lib/libR*.so $RPM_BUILD_ROOT%{_libdir}
mv $RPM_BUILD_ROOT%{_libdir}/%{name}/include $RPM_BUILD_ROOT%{_includedir}/R
ln -sf %{_includedir}/R $RPM_BUILD_ROOT%{_libdir}/R/include
-rm $RPM_BUILD_ROOT%{_bindir}/%{name}
-sed -i -e "s#$RPM_BUILD_ROOT##g" $RPM_BUILD_ROOT%{_libdir}/%{name}/bin/%{name}
-ln -sf %{_libdir}/%{name}/bin/%{name} $RPM_BUILD_ROOT%{_bindir}/%{name}
+
+(cd $RPM_BUILD_ROOT%{_libdir}/%{name}/share/perl/R/
+for f in * ; do
+ ln -s %{_libdir}/%{name}/share/perl/R/$f $RPM_BUILD_ROOT%{perl_vendorlib}/R/
+done)
+(cd $RPM_BUILD_ROOT%{_libdir}/%{name}/share/perl/Text
+for f in * ; do
+ ln -s %{_libdir}/%{name}/share/perl/Text/$f $RPM_BUILD_ROOT%{perl_vendorlib}/Text/
+done)
+
+rm -r $RPM_BUILD_ROOT%{perl_vendorlib}/R
+rm -r $RPM_BUILD_ROOT%{_libdir}/R/share/perl/File
+mv $RPM_BUILD_ROOT%{_libdir}/R/share/perl/R $RPM_BUILD_ROOT%{perl_vendorlib}
%clean
rm -rf $RPM_BUILD_ROOT
-%post
-(cd %{_libdir}/R/library; umask 022; cat */CONTENTS > ../doc/html/search/index.txt
- R_HOME=%{_libdir}/R ../bin/Rcmd perl ../share/perl/build-help.pl --htmllist)
-/sbin/ldconfig
-
-%postun -p /sbin/ldconfig
+%post -p /sbin/ldconfig
+%postun -p /sbin/ldconfig
-%files base
+%files
%defattr(644,root,root,755)
-%doc COPYRIGHTS FAQ NEWS README RESOURCES THANKS Y2K
+%doc NEWS README doc/{AUTHORS,COPYRIGHTS,FAQ,RESOURCES,THANKS}
%{_mandir}/man1/R.1*
+%{_mandir}/man1/Rscript*
%attr(755,root,root) %{_bindir}/R
+%attr(755,root,root) %{_bindir}/Rscript
%dir %{_libdir}/R
%attr(755,root,root) %{_libdir}/R/bin
%attr(755,root,root) %{_libdir}/libR*.so
%{_libdir}/R/include
%{_includedir}/R
%{_libdir}/R/share
-%{_libdir}/R/AUTHORS
+%{_libdir}/R/COPYING
+%{_libdir}/R/NEWS
+%{_libdir}/R/SVN-REVISION
%dir %{_libdir}/R/library
+%{_libdir}/%{name}/library/R.css
# %{_libdir}/R/doc %except %{_libdir}/R/doc/html/{packages.html,search/index.txt}
%dir %{_libdir}/R/doc
%{_libdir}/R/doc/[KRm]*
%dir %{_libdir}/R/doc/html
%{_libdir}/R/doc/html/*.css
%{_libdir}/R/doc/html/[Ra-lr-u]*.html
-%{_libdir}/R/doc/html/packages-head.html
+%{_libdir}/R/doc/html/packages-head*.html
%{_libdir}/R/doc/html/*.jpg
-%dir %{_libdir}/R/doc/html/search
-%{_libdir}/R/doc/html/search/[A-Z]*
-%ghost %{_libdir}/R/doc/html/search/index.txt
%ghost %{_libdir}/R/doc/html/packages.html
-%{_desktopdir}/*
+%{_desktopdir}/*.desktop
+
+%{perl_vendorlib}/R
%attr(755,root,root) %{_libdir}/%{name}/modules
+%{_libdir}/%{name}/library/KernSmooth
+%{_libdir}/%{name}/library/MASS
+%{_libdir}/%{name}/library/Matrix
%{_libdir}/%{name}/library/base
+%{_libdir}/%{name}/library/boot
+%{_libdir}/%{name}/library/class
+%{_libdir}/%{name}/library/cluster
+%{_libdir}/%{name}/library/codetools
%{_libdir}/%{name}/library/datasets
-%{_libdir}/%{name}/library/grid
-%{_libdir}/%{name}/library/graphics
+%{_libdir}/%{name}/library/foreign
%{_libdir}/%{name}/library/grDevices
+%{_libdir}/%{name}/library/graphics
+%{_libdir}/%{name}/library/grid
+%{_libdir}/%{name}/library/lattice
%{_libdir}/%{name}/library/methods
-%{_libdir}/%{name}/library/utils
-%{_libdir}/%{name}/library/tcltk
+%{_libdir}/%{name}/library/mgcv
+%{_libdir}/%{name}/library/nlme
+%{_libdir}/%{name}/library/nnet
+%{_libdir}/%{name}/library/rpart
+%{_libdir}/%{name}/library/spatial
%{_libdir}/%{name}/library/splines
%{_libdir}/%{name}/library/stats
%{_libdir}/%{name}/library/stats4
+%{_libdir}/%{name}/library/survival
+%{_libdir}/%{name}/library/tcltk
%{_libdir}/%{name}/library/tools
+%{_libdir}/%{name}/library/utils
-%files recommended
+%{_pkgconfigdir}/*.pc
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