%bcond_without tcl # disable tcl support
%bcond_without tests # do not run "make check"
#
+# NOTE:
+# - /etc/localtime must be present for tests to work
+#
# TODO:
+# - faulty build on i486 (test stats-Ex.R):
+# error in optim(init[mask], getLike, method = "L-BFGS-B", lower = rep(0, :
+# non-finite value supplied by optim
# - script for rpm to autoprovides/autorequires R internals
#
-%define KernSmooth_version 2.22r22
-%define VR_version 7.2r45
-%define boot_version 1.2r34
-%define cluster_version 1.11.11
-%define foreign_version 0.8r29
-%define lattice_version 0.17r17
-%define mgcv_version 1.4r1.1
-%define nlme_version 3.1r89
-%define rpart_version 3.1r42
-%define survival_version 2.34r1
-
%include /usr/lib/rpm/macros.perl
Summary: A language for data analysis and graphics
Summary(pl.UTF-8): Język do analizy danych oraz grafiki
Name: R
-Version: 2.8.1
-Release: 1.1
+Version: 2.11.0
+Release: 2
License: Mixed (distributable), mostly GPL
Group: Development/Languages
# CRAN master site: ftp://cran.r-project.org/pub/R/src/
Source0: ftp://stat.ethz.ch/R-CRAN/src/base/R-2/%{name}-%{version}.tar.gz
-# Source0-md5: acd40621b8942a2464daa2f9cef3273d
+# Source0-md5: c6c1e866299f533617750889c729bfb3
Source1: %{name}.desktop
-Patch0: %{name}-libicuuc.patch
URL: http://www.r-project.org/
BuildRequires: autoconf
BuildRequires: automake
BuildRequires: pango-devel
BuildRequires: pcre-devel
BuildRequires: perl-base >= 1:5.6
+BuildRequires: pkgconfig
BuildRequires: readline-devel
BuildRequires: rpm-perlprov
%{?with_tcl:BuildRequires: tcl-devel}
BuildRequires: xorg-lib-libX11-devel
BuildRequires: xorg-lib-libXmu-devel
BuildRequires: xorg-lib-libXt-devel
+BuildRequires: xz-devel
BuildRequires: zip
BuildRequires: zlib-devel >= 1.1.3
#Requires: lpr
+Requires(post): perl-base
+Requires(post): textutils
+Suggests: rkward
+Obsoletes: R-base
+Obsoletes: R-contrib
+Obsoletes: R-recommended
BuildRoot: %{tmpdir}/%{name}-%{version}-root-%(id -u -n)
%description
Chambersa i Wilksa) oraz Scheme (Sussmana). R jest podobny do S, ale
implementacja i semantyka wywodzi się ze Scheme.
-%package base
-Summary: The R base distribution
-Summary(pl.UTF-8): Podstawowa dystrybucja R
-License: GPL v2 / LGPL
-Group: Development/Languages
-Requires(post): perl-base
-Requires(post): textutils
-Provides: R-cran-base
-Provides: R-cran-boot = %{boot_version}
-Provides: R-cran-class = %{VR_version}
-Provides: R-cran-cluster = %{cluster_version}
-Provides: R-cran-datasets
-Provides: R-cran-foreign = %{foreign_version}
-Provides: R-cran-graphics
-Provides: R-cran-grDevices
-Provides: R-cran-grid
-Provides: R-cran-KernSmooth = %{KernSmooth_version}
-Provides: R-cran-lattice = %{lattice_version}
-Provides: R-cran-MASS = %{VR_version}
-Provides: R-cran-methods
-Provides: R-cran-mgcv = %{mgcv_version}
-Provides: R-cran-nlme = %{nlme_version}
-Provides: R-cran-nnet = %{VR_version}
-Provides: R-cran-rpart = %{rpart_version}
-Provides: R-cran-spatial = %{VR_version}
-Provides: R-cran-splines
-Provides: R-cran-stats
-Provides: R-cran-stats4
-Provides: R-cran-survival = %{survival_version}
-Provides: R-cran-tcltk
-Provides: R-cran-tools
-Provides: R-cran-utils
-Provides: R-cran-VR = %{VR_version}
-Obsoletes: R-contrib
-Obsoletes: R-cran-boot
-Obsoletes: R-cran-class
-Obsoletes: R-cran-cluster
-Obsoletes: R-cran-foreign
-Obsoletes: R-cran-KernSmooth
-Obsoletes: R-cran-lattice
-Obsoletes: R-cran-MASS
-Obsoletes: R-cran-mgcv
-Obsoletes: R-cran-nlme
-Obsoletes: R-cran-nnet
-Obsoletes: R-cran-rpart
-Obsoletes: R-cran-spatial
-Obsoletes: R-cran-survival
-Obsoletes: R-cran-VR
-Obsoletes: R-recommended
-
-%description base
-R is a language and run-time environment for carrying out interactive
-statistical data analysis. It is not entirely dissimilar to the S
-language developed at AT&T Bell Laboratories (and now Lucent
-Technologies). Indeed, S users will find the environment quite
-familiar and a good deal of S software will run without change under
-R.
-
-%description base -l pl.UTF-8
-R jest językiem i środowiskiem uruchomieniowym do interaktywnej
-analizy danych statystycznych. R nie jest całkowicie zgodny z językiem
-S opracowanym w AT&T Bell Laboratiories (a teraz Lucent Technologies),
-mimo to użytkownicy S zauważą zbliżone środowisko, a duża część
-oprogramowania w S będzie działała bez zmian w R.
-
%prep
%setup -q
-%patch0 -p1
%build
%{__aclocal} -I m4
--with-system-zlib \
--with-system-bzlib \
--with-system-pcre \
+ --with-system-xz \
--with-libpng \
--with-jpeglib \
--with-blas \
%if %{with tests}
%{__make} check
%endif
-%{__make} docs help pdf html info
+%{__make} docs pdf info
%install
rm -rf $RPM_BUILD_ROOT
install %{SOURCE1} $RPM_BUILD_ROOT%{_desktopdir}
-find $RPM_BUILD_ROOT%{_libdir}/R -name 'Makefile*' -exec rm -f {} \;
mv $RPM_BUILD_ROOT%{_libdir}/R/lib/libR*.so $RPM_BUILD_ROOT%{_libdir}
mv $RPM_BUILD_ROOT%{_libdir}/%{name}/include $RPM_BUILD_ROOT%{_includedir}/R
ln -sf %{_includedir}/R $RPM_BUILD_ROOT%{_libdir}/R/include
-rm $RPM_BUILD_ROOT%{_bindir}/%{name}
-sed -i -e "s#$RPM_BUILD_ROOT##g" $RPM_BUILD_ROOT%{_libdir}/%{name}/bin/%{name}
-ln -sf %{_libdir}/%{name}/bin/%{name} $RPM_BUILD_ROOT%{_bindir}/%{name}
(cd $RPM_BUILD_ROOT%{_libdir}/%{name}/share/perl/R/
for f in * ; do
ln -s %{_libdir}/%{name}/share/perl/Text/$f $RPM_BUILD_ROOT%{perl_vendorlib}/Text/
done)
-rm -r $RPM_BUILD_ROOT%{perl_vendorlib}/{Text,R}
-rm -r $RPM_BUILD_ROOT%{_libdir}/R/share/perl/{File,Text}
+rm -r $RPM_BUILD_ROOT%{perl_vendorlib}/R
+rm -r $RPM_BUILD_ROOT%{_libdir}/R/share/perl/File
mv $RPM_BUILD_ROOT%{_libdir}/R/share/perl/R $RPM_BUILD_ROOT%{perl_vendorlib}
%clean
rm -rf $RPM_BUILD_ROOT
-%post
-(cd %{_libdir}/R/library; umask 022; cat */CONTENTS > ../doc/html/search/index.txt
- R_HOME=%{_libdir}/R ../bin/Rcmd perl ../share/perl/build-help.pl --index)
-/sbin/ldconfig
-
-%postun -p /sbin/ldconfig
+%post -p /sbin/ldconfig
+%postun -p /sbin/ldconfig
-%files base
+%files
%defattr(644,root,root,755)
%doc NEWS README doc/{AUTHORS,COPYRIGHTS,FAQ,RESOURCES,THANKS}
%{_libdir}/R/doc/html/[Ra-lr-u]*.html
%{_libdir}/R/doc/html/packages-head*.html
%{_libdir}/R/doc/html/*.jpg
-%dir %{_libdir}/R/doc/html/search
-%{_libdir}/R/doc/html/search/[A-Z]*
-%ghost %{_libdir}/R/doc/html/search/index.txt
%ghost %{_libdir}/R/doc/html/packages.html
%{_desktopdir}/*.desktop
%{_libdir}/%{name}/library/KernSmooth
%{_libdir}/%{name}/library/MASS
+%{_libdir}/%{name}/library/Matrix
%{_libdir}/%{name}/library/base
%{_libdir}/%{name}/library/boot
%{_libdir}/%{name}/library/class
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