]> git.pld-linux.org Git - packages/R-simpleaffy.git/commitdiff
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authorJan Rękorajski <baggins@pld-linux.org>
Thu, 18 Oct 2012 14:10:37 +0000 (16:10 +0200)
committerJan Rękorajski <baggins@pld-linux.org>
Thu, 18 Oct 2012 14:10:37 +0000 (16:10 +0200)
R-simpleaffy.spec [new file with mode: 0644]

diff --git a/R-simpleaffy.spec b/R-simpleaffy.spec
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+%define                packname        simpleaffy
+
+Summary:       Very simple high level analysis of Affymetrix data
+Name:          R-%{packname}
+Version:       2.34.0
+Release:       1
+License:       LGPL
+Group:         Applications/Engineering
+Source0:       http://www.bioconductor.org/packages/release/bioc/src/contrib/%{packname}_%{version}.tar.gz
+# Source0-md5: 63e0aa6b2b1737ee748cd55f646a8e80
+URL:           http://www.bioconductor.org/packages/release/bioc/html/simpleaffy.html
+BuildRequires: R-Biobase
+BuildRequires: R
+BuildRequires: R-BiocGenerics
+BuildRequires: R-affy
+BuildRequires: R-genefilter
+BuildRequires: R-gcrma
+BuildRequires: texlive-latex
+Requires:      R-Biobase
+Requires:      R
+Requires:      R-BiocGenerics
+Requires:      R-affy
+Requires:      R-genefilter
+Requires:      R-gcrma
+BuildRoot:     %{tmpdir}/%{name}-%{version}-root-%(id -u -n)
+
+%description
+Provides high level functions for reading Affy .CEL files, phenotypic
+data, and then computing simple things with it, such as t-tests, fold
+changes and the like. Makes heavy use of the affy library. Also has
+some basic scatter plot functions and mechanisms for generating high
+resolution journal figures.
+
+%prep
+%setup -q -c -n %{packname}
+
+%build
+
+%install
+rm -rf $RPM_BUILD_ROOT
+install -d $RPM_BUILD_ROOT%{_libdir}/R/library
+
+%{_bindir}/R CMD INSTALL -l $RPM_BUILD_ROOT%{_libdir}/R/library %{packname}
+
+%clean
+rm -rf $RPM_BUILD_ROOT
+
+%files
+%defattr(644,root,root,755)
+%doc %{_libdir}/R/library/%{packname}/DESCRIPTION
+%doc %{_libdir}/R/library/%{packname}/doc
+%doc %{_libdir}/R/library/%{packname}/html
+%dir %{_libdir}/R/library/%{packname}
+%{_libdir}/R/library/%{packname}/Meta
+%{_libdir}/R/library/%{packname}/NAMESPACE
+%{_libdir}/R/library/%{packname}/INDEX
+%{_libdir}/R/library/%{packname}/R
+%{_libdir}/R/library/%{packname}/help
+%{_libdir}/R/library/%{packname}/data
+%{_libdir}/R/library/%{packname}/extdata
+%dir %{_libdir}/R/library/%{packname}/libs
+%attr(755,root,root) %{_libdir}/R/library/%{packname}/libs/%{packname}.so
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