R-makecdfenv.spec

   1 %define         packname        makecdfenv
   2
   3 Summary:        CDF Environment Maker
   4 Name:           R-%{packname}
   5 Version:        1.36.0
   6 Release:        1
   7 License:        LGPL v2+
   8 Group:          Applications/Engineering
   9 Source0:        http://bioconductor.org/packages/release/bioc/src/contrib/%{packname}_%{version}.tar.gz
  10 # Source0-md5:  c24082bfa9e64e8934b4e7c5fec60af3
  11 Patch0:         bogus-deps.patch
  12 URL:            http://bioconductor.org/packages/release/bioc/html/%{packname}.html
  13 BuildRequires:  R
  14 BuildRequires:  R-Biobase
  15 BuildRequires:  R-affy
  16 BuildRequires:  texlive-latex
  17 BuildRequires:  zlib-devel
  18 Requires:       R
  19 Requires:       R-Biobase
  20 Requires:       R-affy
  21 BuildRoot:      %{tmpdir}/%{name}-%{version}-root-%(id -u -n)
  22
  23 %description
  24 This package has two functions. One reads a Affymetrix chip
  25 description file (CDF) and creates a hash table environment containing
  26 the location/probe set membership mapping. The other creates a package
  27 that automatically loads that environment.
  28
  29 %prep
  30 %setup -q -c -n %{packname}
  31 %patch0 -p1
  32
  33 %build
  34 R CMD build %{packname}
  35
  36 %install
  37 rm -rf $RPM_BUILD_ROOT
  38 install -d $RPM_BUILD_ROOT%{_libdir}/R/library
  39
  40 R CMD INSTALL %{packname} -l $RPM_BUILD_ROOT%{_libdir}/R/library
  41
  42 %clean
  43 rm -rf $RPM_BUILD_ROOT
  44
  45 %files
  46 %defattr(644,root,root,755)
  47 %dir %{_libdir}/R/library/%{packname}
  48 %doc %{_libdir}/R/library/%{packname}/doc
  49 %doc %{_libdir}/R/library/%{packname}/html
  50 %doc %{_libdir}/R/library/%{packname}/DESCRIPTION
  51 %{_libdir}/R/library/%{packname}/INDEX
  52 %{_libdir}/R/library/%{packname}/NAMESPACE
  53 %{_libdir}/R/library/%{packname}/Code
  54 %{_libdir}/R/library/%{packname}/Meta
  55 %{_libdir}/R/library/%{packname}/extdata
  56 %{_libdir}/R/library/%{packname}/R
  57 %{_libdir}/R/library/%{packname}/help
  58 %dir %{_libdir}/R/library/%{packname}/libs
  59 %attr(755,root,root) %{_libdir}/R/library/%{packname}/libs/makecdfenv.so