R-limma.spec

   1 %define         packname        limma
   2
   3 Summary:        Linear Models for Microarray Data
   4 Name:           R-%{packname}
   5 Version:        3.14.1
   6 Release:        1
   7 License:        Artistic 2.0
   8 Group:          X11/Applications
   9 URL:            http://www.bioconductor.org/packages/release/bioc/html/biomaRt.html
  10 Source0:        http://www.bioconductor.org/packages/release/bioc/src/contrib/%{packname}_%{version}.tar.gz
  11 # Source0-md5:  82e11a7ca0912249810daeb57dacfb3b
  12 BuildRequires:  R
  13 BuildRequires:  texlive-latex
  14 Requires:       R
  15 BuildRoot:      %{tmpdir}/%{name}-%{version}-root-%(id -u -n)
  16
  17 %description
  18 Data analysis, linear models and differential expression for
  19 microarray data.
  20
  21 %prep
  22 %setup -c -q -n %{packname}
  23
  24 %build
  25
  26 %install
  27 rm -rf $RPM_BUILD_ROOT
  28 install -d $RPM_BUILD_ROOT%{_libdir}/R/library
  29 %{_bindir}/R CMD INSTALL %{packname} -l $RPM_BUILD_ROOT%{_libdir}/R/library
  30 # Clean up in advance of check
  31 test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
  32 rm -rf $RPM_BUILD_ROOT%{_libdir}/R/library/R.css
  33
  34 %clean
  35 rm -rf $RPM_BUILD_ROOT
  36
  37 %files
  38 %defattr(644,root,root,755)
  39 %dir %{_libdir}/R/library/%{packname}/
  40 %doc %{_libdir}/R/library/%{packname}/doc/
  41 %doc %{_libdir}/R/library/%{packname}/html/
  42 %doc %{_libdir}/R/library/%{packname}/DESCRIPTION
  43 %{_libdir}/R/library/%{packname}/CITATION
  44 %{_libdir}/R/library/%{packname}/NAMESPACE
  45 %{_libdir}/R/library/%{packname}/INDEX
  46 %{_libdir}/R/library/%{packname}/Meta/
  47 %{_libdir}/R/library/%{packname}/R/
  48 %{_libdir}/R/library/%{packname}/help/
  49 %{_libdir}/R/library/%{packname}/NEWS.Rd
  50 %dir %{_libdir}/R/library/%{packname}/libs
  51 %attr(755,root,root) %{_libdir}/R/library/%{packname}/libs/limma.so