projects / packages / R-BSgenome.git / blame
| Commit | Line | Data |
|---|---|---|
| 0699c71c JR |
1 | %define packname BSgenome |
| 2 | ||
| 3 | Summary: Infrastructure for Biostrings-based genome data packages | |
| 4 | Name: R-%{packname} | |
| 92fa702b | 5 | Version: 1.30.0 |
| 0699c71c JR |
6 | Release: 1 |
| 7 | License: Artistic 2.0 | |
| 8 | Group: Applications/Science | |
| 9 | Source0: http://bioconductor.org/packages/release/bioc/src/contrib/%{packname}_%{version}.tar.gz | |
| 92fa702b JR |
10 | # Source0-md5: 6ae0eaf797f1b64fc72f0be329fd3a0c |
| 11 | URL: http://bioconductor.org/packages/release/bioc/html/BSgenome.html | |
| 0699c71c JR |
12 | BuildRequires: R |
| 13 | BuildRequires: R-BiocGenerics >= 0.3.2 | |
| 14 | BuildRequires: R-IRanges >= 1.13.6 | |
| 15 | BuildRequires: R-GenomicRanges >= 1.7.5 | |
| 16 | BuildRequires: R-Biostrings >= 2.23.3 | |
| 17 | BuildRequires: texlive-latex | |
| 18 | Requires: R | |
| 19 | Requires: R-BiocGenerics >= 0.3.2 | |
| 20 | Requires: R-IRanges >= 1.13.6 | |
| 21 | Requires: R-GenomicRanges >= 1.7.5 | |
| 22 | Requires: R-Biostrings >= 2.23.3 | |
| 23 | BuildRoot: %{tmpdir}/%{name}-%{version}-root-%(id -u -n) | |
| 24 | ||
| 25 | %description | |
| 26 | Infrastructure shared by all the Biostrings-based genome data packages. | |
| 27 | ||
| 28 | %prep | |
| 29 | %setup -c -q -n %{packname} | |
| 30 | ||
| 31 | %build | |
| 32 | ||
| 33 | %install | |
| 34 | rm -rf $RPM_BUILD_ROOT | |
| 35 | install -d $RPM_BUILD_ROOT%{_libdir}/R/library | |
| 36 | ||
| 37 | %{_bindir}/R CMD INSTALL -l $RPM_BUILD_ROOT%{_libdir}/R/library %{packname} | |
| 38 | ||
| 39 | %clean | |
| 40 | rm -rf $RPM_BUILD_ROOT | |
| 41 | ||
| 42 | %files | |
| 43 | %defattr(644,root,root,755) | |
| 44 | %dir %{_libdir}/R/library/%{packname} | |
| 211795ef | 45 | %{_libdir}/R/library/%{packname}/BSgenomeDataPkg-template |
| 0699c71c JR |
46 | %{_libdir}/R/library/%{packname}/INDEX |
| 47 | %{_libdir}/R/library/%{packname}/Meta/ | |
| 48 | %{_libdir}/R/library/%{packname}/R/ | |
| 49 | %{_libdir}/R/library/%{packname}/help/ | |
| 0699c71c | 50 | %{_libdir}/R/library/%{packname}/NAMESPACE |
| 0699c71c | 51 | %{_libdir}/R/library/%{packname}/extdata |
| 0699c71c JR |
52 | %doc %{_libdir}/R/library/%{packname}/doc |
| 53 | %doc %{_libdir}/R/library/%{packname}/DESCRIPTION | |
| 54 | %doc %{_libdir}/R/library/%{packname}/html |