Summary: A language for data analysis and graphics
Summary(pl): Jêzyk do analizy danych oraz grafiki
Name: R
-Version: 1.4.1
+Version: 1.6.1
Release: 2
-Source0: ftp://stat.ethz.ch/R-CRAN/src/base/%{name}-%{version}.tgz
-Source1: ftp://stat.ethz.ch/R-CRAN/src/contrib/KernSmooth_2.22-7.tar.gz
-Source2: ftp://stat.ethz.ch/R-CRAN/src/contrib/VR_6.3-2.tar.gz
-Source3: ftp://stat.ethz.ch/R-CRAN/src/contrib/acepack_1.3.tar.gz
-Source4: ftp://stat.ethz.ch/R-CRAN/src/contrib/boot_1.2-7.tar.gz
-Source5: ftp://stat.ethz.ch/R-CRAN/src/contrib/bootstrap_1.0-9.tar.gz
-Source6: ftp://stat.ethz.ch/R-CRAN/src/contrib/cluster_1.4-0.tar.gz
-Source7: ftp://stat.ethz.ch/R-CRAN/src/contrib/date_1.2-12.tar.gz
-Source8: ftp://stat.ethz.ch/R-CRAN/src/contrib/e1071_1.2-1.tar.gz
-Source9: ftp://stat.ethz.ch/R-CRAN/src/contrib/foreign_0.4-9.tar.gz
-Source10: ftp://stat.ethz.ch/R-CRAN/src/contrib/fracdiff_1.0-7.tar.gz
-Source11: ftp://stat.ethz.ch/R-CRAN/src/contrib/gee_4.13-6.tar.gz
-Source12: ftp://stat.ethz.ch/R-CRAN/src/contrib/leaps_2.4.tar.gz
-Source13: ftp://stat.ethz.ch/R-CRAN/src/contrib/mgcv_0.7-1.tar.gz
-Source14: ftp://stat.ethz.ch/R-CRAN/src/contrib/mlbench_0.5-4.tar.gz
-Source15: ftp://stat.ethz.ch/R-CRAN/src/contrib/nlme_3.1-23.tar.gz
-Source16: ftp://stat.ethz.ch/R-CRAN/src/contrib/oz_1.0-6.tar.gz
-Source17: ftp://stat.ethz.ch/R-CRAN/src/contrib/polynom_1.1-8.tar.gz
-Source18: ftp://stat.ethz.ch/R-CRAN/src/contrib/princurve_1.1-3.tar.gz
-Source19: ftp://stat.ethz.ch/R-CRAN/src/contrib/quadprog_1.4-4.tar.gz
-Source20: ftp://stat.ethz.ch/R-CRAN/src/contrib/rpart_3.1-5.tar.gz
-Source21: ftp://stat.ethz.ch/R-CRAN/src/contrib/survival_2.8-2.tar.gz
-Source22: ftp://stat.ethz.ch/R-CRAN/src/contrib/xgobi_1.2-5.tar.gz
-Source23: ftp://stat.ethz.ch/R-CRAN/src/contrib/Archive/integrate_2.2-3.tar.gz
License: Mixed (distributable), mostly GPL
Group: Development/Languages
+Source0: ftp://stat.ethz.ch/R-CRAN/src/base/%{name}-%{version}.tgz
+Source1: ftp://stat.ethz.ch/R-CRAN/src/contrib/KernSmooth_2.22-8.tar.gz
+Source2: ftp://stat.ethz.ch/R-CRAN/src/contrib/VR_7.0-9.tar.gz
+Source3: ftp://stat.ethz.ch/R-CRAN/src/contrib/acepack_1.3-2.tar.gz
+Source4: ftp://stat.ethz.ch/R-CRAN/src/contrib/boot_1.2-8.tar.gz
+Source5: ftp://stat.ethz.ch/R-CRAN/src/contrib/bootstrap_1.0-11.tar.gz
+Source6: ftp://stat.ethz.ch/R-CRAN/src/contrib/cluster_1.6-2.tar.gz
+Source7: ftp://stat.ethz.ch/R-CRAN/src/contrib/date_1.2-12.tar.gz
+Source8: ftp://stat.ethz.ch/R-CRAN/src/contrib/e1071_1.3-5.tar.gz
+Source9: ftp://stat.ethz.ch/R-CRAN/src/contrib/foreign_0.5-6.tar.gz
+Source10: ftp://stat.ethz.ch/R-CRAN/src/contrib/fracdiff_1.0-8.tar.gz
+Source11: ftp://stat.ethz.ch/R-CRAN/src/contrib/gee_4.13-10.tar.gz
+Source12: ftp://stat.ethz.ch/R-CRAN/src/contrib/grid_0.7-1.tar.gz
+Source13: ftp://stat.ethz.ch/R-CRAN/src/contrib/lattice_0.6-6.tar.gz
+Source14: ftp://stat.ethz.ch/R-CRAN/src/contrib/leaps_2.5.tar.gz
+Source15: ftp://stat.ethz.ch/R-CRAN/src/contrib/mgcv_0.8-6.tar.gz
+Source16: ftp://stat.ethz.ch/R-CRAN/src/contrib/mlbench_0.5-7.tar.gz
+Source17: ftp://stat.ethz.ch/R-CRAN/src/contrib/nlme_3.1-33.tar.gz
+Source18: ftp://stat.ethz.ch/R-CRAN/src/contrib/oz_1.0-6.tar.gz
+Source19: ftp://stat.ethz.ch/R-CRAN/src/contrib/polynom_1.1-10.tar.gz
+Source20: ftp://stat.ethz.ch/R-CRAN/src/contrib/princurve_1.1-5.tar.gz
+Source21: ftp://stat.ethz.ch/R-CRAN/src/contrib/quadprog_1.4-5.tar.gz
+Source22: ftp://stat.ethz.ch/R-CRAN/src/contrib/rpart_3.1-8.tar.gz
+Source23: ftp://stat.ethz.ch/R-CRAN/src/contrib/survival_2.9-6.tar.gz
+Source24: ftp://stat.ethz.ch/R-CRAN/src/contrib/xgobi_1.2-7.tar.gz
+Source25: ftp://stat.ethz.ch/R-CRAN/src/contrib/Archive/integrate_2.2-3.tar.gz
+Source26: %{name}.desktop
URL: http://stat.auckland.ac.nz/r/r.html
-Provides: R-base R-contrib
BuildRequires: autoconf
BuildRequires: automake
BuildRequires: libstdc++-devel
BuildRequires: tetex-pdftex
BuildRequires: zip
BuildRequires: XFree86-devel
+BuildRequires: blas-devel
BuildRequires: libpng-devel >= 1.0.5
BuildRequires: libjpeg-devel >= 6b
BuildRequires: libxml-devel
#BuildRequires: lpr
%{!?_without_gnome:BuildRequires: gnome-libs-devel}
%{!?_without_gnome:BuildRequires: ORBit-devel}
-%{!?_without_gnome:BuildRequires: libglade-devel}
+%{!?_without_gnome:BuildRequires: libglade-gnome-devel}
+Provides: R-base
+Provides: R-contrib
BuildRoot: %{tmpdir}/%{name}-%{version}-root-%(id -u -n)
%description
%package base
Summary: The R base distribution
Summary(pl): Podstawowa dystrybucja R
+License: GPL v2 / LGPL
Group: Development/Languages
+Requires(post): textutils
+Requires(post): perl
Provides: R-ctest R-eda R-lqs R-methods R-modreg R-mva R-nls R-splines
Provides: R-stepfun R-tcltk R-tools R-ts
-License: GPL v2 / LGPL
%description base
R is a language and run-time environment for carrying out interactive
Summary: Recommended contributed packages for the R language
Summary(pl): Zalecane dodatkowe pakiety do jêzyka R
Group: Development/Languages
-Provides: R-KernSmooth R-VR R-boot R-cluster R-foreign R-mgcv R-nlme
-Provides: R-rpart R-survival
+Provides: R-KernSmooth R-VR R-boot R-cluster R-foreign R-grid
+Provides: R-lattice R-mgcv R-nlme R-rpart R-survival
License: GPL, free or free for non-commercial use
URL: http://www.ci.tuwien.ac.at/R/
+Requires(post,postun): R-base
+Requires(post,postun): textutils
+Requires(post,postun): perl
Requires: R-base >= %{version}
Obsoletes: R-survival4 R-MASS R-clus R-class R-nnet R-spatial
%package contrib
Summary: Contributed packages for the R language
Summary(pl): Dodatkowe pakiety do jêzyka R
-Group: Development/Languages
-Provides: R-acepack R-bootstrap R-date R-e1071 R-fracdiff R-gee
-Provides: R-integrate R-leaps R-oz R-polynom R-princurve R-quadprog
-Provides: R-xgobi
License: Mixed
+Group: Development/Languages
URL: http://www.ci.tuwien.ac.at/R/
+Requires(post,postun): R-base
+Requires(post,postun): textutils
+Requires(post,postun): perl
Requires: R-base >= %{version}
Requires: R-VR
+Provides: R-acepack R-bootstrap R-date R-e1071 R-fracdiff R-gee
+Provides: R-integrate R-leaps R-oz R-polynom R-princurve R-quadprog
+Provides: R-xgobi
Obsoletes: R-principal.curve
%description contrib
Group: Development/Languages
License: GPL
URL: http://www.ics.uci.edu/~mlearn/MLRepository.html
+Requires(post,postun): R-base
+Requires(post,postun): textutils
+Requires(post,postun): perl
Requires: R-base >= %{version}
%description mlbench
%setup -q -c -n R-cran -T -D -b 21
%setup -q -c -n R-cran -T -D -b 22
%setup -q -c -n R-cran -T -D -b 23
-%setup -q
+%setup -q -c -n R-cran -T -D -b 24
+%setup -q -c -n R-cran -T -D -b 25
+%setup -q
#%setup -q -T -D -a 14
# These files have the path for PERL hard-coded as /usr/local/bin/perl
rm -f ./doc/keyword-test.orig ./etc/undoc/R-funs.orig ./etc/undoc/extrExamp.orig
%build
-aclocal
-autoconf
+%{__aclocal}
+%{__autoconf}
cp -f /usr/share/automake/config.* .
%configure \
%{!?_without_gnome:--with-gnome} \
%{__make} help
%{__make} html
%{__make} clean
-# %{__make} acclean
# Install contrib packages
#
%install
rm -rf $RPM_BUILD_ROOT
-install -d $RPM_BUILD_ROOT{%{_bindir},%{_mandir}/man1,%{_libdir}/R}
+install -d $RPM_BUILD_ROOT{%{_bindir},%{_mandir}/man1,%{_libdir}/R,%{_applnkdir}/Scientific/Numerics}
+
+install %{SOURCE26} $RPM_BUILD_ROOT%{_applnkdir}/Scientific/Numerics/%{name}.desktop
+
+mv doc/R.1 $RPM_BUILD_ROOT%{_mandir}/man1/
+sed "s,`pwd`,%{_libdir}/R,g" < bin/R > bin/R. ; mv bin/R. bin/R
+mv bin/R $RPM_BUILD_ROOT%{_bindir}/R
-install doc/R.1 $RPM_BUILD_ROOT%{_mandir}/man1/
-install bin/R $RPM_BUILD_ROOT%{_bindir}/R
+find . -name 'Makefile*' -exec rm -f {} \;
+rm -rf etc/*.old
-# cp -R afm bin cmd demos doc etc html include library $RPM_BUILD_ROOT%{_libdir}/R
-cp -R afm bin doc etc include library modules $RPM_BUILD_ROOT%{_libdir}/R
+cp -R AUTHORS afm bin doc etc include library modules share \
+ $RPM_BUILD_ROOT%{_libdir}/R
%clean
-# rm -rf $RPM_BUILD_ROOT
+rm -rf $RPM_BUILD_ROOT
%post base
-(cd %{_libdir}/R/library; cat */TITLE > LibIndex; ../etc/build-htmlpkglist)
-
-%preun base
-# These files are not owned by any package, so we have to remove them
-# but only if this is the last version of R-base on the system.
-#
-if [ "$1" = 0 ];
-then
- rm -f %{_libdir}/R/library/LibIndex
- rm -f %{_libdir}/R/library/index.html
-fi
+(cd %{_libdir}/R/library; umask 022; cat */CONTENTS > ../doc/html/search/index.txt
+ R_HOME=%{_libdir}/R ../bin/Rcmd perl ../share/perl/build-help.pl --htmllist)
+
+#%preun base
+## These files are not owned by any package, so we have to remove them
+## but only if this is the last version of R-base on the system.
+##
+#if [ "$1" = 0 ];
+#then
+# rm -f %{_libdir}/R/doc/html/search/index.txt
+# rm -f %{_libdir}/R/doc/html/packages.html
+#fi
%post contrib
-(cd %{_libdir}/R/library; cat */TITLE > LibIndex; ../etc/build-htmlpkglist)
+(cd %{_libdir}/R/library; umask 022; cat */CONTENTS > ../doc/html/search/index.txt
+ R_HOME=%{_libdir}/R ../bin/Rcmd perl ../share/perl/build-help.pl --htmllist)
%postun contrib
-(cd %{_libdir}/R/library; cat */TITLE > LibIndex; ../etc/build-htmlpkglist)
+if [ -f ../bin/Rcmd ];then
+(cd %{_libdir}/R/library; umask 022; cat */CONTENTS > ../doc/html/search/index.txt
+ R_HOME=%{_libdir}/R ../bin/Rcmd perl ../share/perl/build-help.pl --htmllist)
+fi
+
+%post recommended
+(cd %{_libdir}/R/library; umask 022; cat */CONTENTS > ../doc/html/search/index.txt
+ R_HOME=%{_libdir}/R ../bin/Rcmd perl ../share/perl/build-help.pl --htmllist)
+
+%postun recommended
+if [ -f ../bin/Rcmd ];then
+(cd %{_libdir}/R/library; umask 022; cat */CONTENTS > ../doc/html/search/index.txt
+ R_HOME=%{_libdir}/R ../bin/Rcmd perl ../share/perl/build-help.pl --htmllist)
+fi
%post mlbench
-(cd %{_libdir}/R/library; cat */TITLE > LibIndex; ../etc/build-htmlpkglist)
+(cd %{_libdir}/R/library; umask 022; cat */CONTENTS > ../doc/html/search/index.txt
+ R_HOME=%{_libdir}/R ../bin/Rcmd perl ../share/perl/build-help.pl --htmllist)
%postun mlbench
-(cd %{_libdir}/R/library; cat */TITLE > LibIndex; ../etc/build-htmlpkglist)
+if [ -f ../bin/Rcmd ];then
+(cd %{_libdir}/R/library; umask 022; cat */CONTENTS > ../doc/html/search/index.txt
+ R_HOME=%{_libdir}/R ../bin/Rcmd perl ../share/perl/build-help.pl --htmllist)
+fi
%files base
%defattr(644,root,root,755)
-%attr(-,root,root) %{_mandir}/man1/R.1*
-%attr(-,root,root) %{_bindir}/R
-%attr(-,root,root) %dir %{_libdir}/R
-%attr(-,root,root) %{_libdir}/R/afm
-%attr(-,root,root) %{_libdir}/R/bin
-# %attr(-,root,root) %{_libdir}/R/cmd
-# %attr(-,root,root) %{_libdir}/R/demos
-%attr(-,root,root) %{_libdir}/R/etc
-%attr(-,root,root) %{_libdir}/R/include
-%attr(-,root,root) %dir %{_libdir}/R/library
-%attr(-,root,root) %{_libdir}/R/library/base
-%attr(-,root,root) %{_libdir}/R/library/ctest
-%attr(-,root,root) %{_libdir}/R/library/eda
-%attr(-,root,root) %{_libdir}/R/library/lqs
-%attr(-,root,root) %{_libdir}/R/library/methods
-%attr(-,root,root) %{_libdir}/R/library/modreg
-%attr(-,root,root) %{_libdir}/R/library/mva
-%attr(-,root,root) %{_libdir}/R/library/nls
-%attr(-,root,root) %{_libdir}/R/library/splines
-%attr(-,root,root) %{_libdir}/R/library/stepfun
-%attr(-,root,root) %{_libdir}/R/library/tcltk
-%attr(-,root,root) %{_libdir}/R/library/tools
-%attr(-,root,root) %{_libdir}/R/library/ts
-%attr(-,root,root) %{_libdir}/R/modules
-%attr(-,root,root) %doc CHANGES COPYING COPYRIGHTS MIRROR-SITES PROJECTS README RESOURCES TASKS
-%attr(-,root,root) %doc html
+%{_mandir}/man1/R.1*
+%attr(755,root,root) %{_bindir}/R
+%dir %{_libdir}/R
+%{_libdir}/R/afm
+%attr(755,root,root) %{_libdir}/R/bin
+%{_libdir}/R/etc
+%{_libdir}/R/include
+%{_libdir}/R/share
+%{_libdir}/R/AUTHORS
+%dir %{_libdir}/R/library
+%{_libdir}/R/library/*.css
+%{_libdir}/R/library/base
+%{_libdir}/R/library/ctest
+%{_libdir}/R/library/eda
+%{_libdir}/R/library/lqs
+%{_libdir}/R/library/methods
+%{_libdir}/R/library/modreg
+%{_libdir}/R/library/mva
+%{_libdir}/R/library/nls
+%{_libdir}/R/library/splines
+%{_libdir}/R/library/stepfun
+%{_libdir}/R/library/tcltk
+%{_libdir}/R/library/tools
+%{_libdir}/R/library/ts
+%{_libdir}/R/modules
+%doc BUGS COPYRIGHTS FAQ NEWS README RESOURCES THANKS Y2K
+# %{_libdir}/R/doc %except %{_libdir}/R/doc/html/{packages.html,search/index.txt}
+%dir %{_libdir}/R/doc
+%{_libdir}/R/doc/[KRm]*
+%dir %{_libdir}/R/doc/html
+%{_libdir}/R/doc/html/*.css
+%{_libdir}/R/doc/html/[Ra-lr-u]*.html
+%{_libdir}/R/doc/html/packages-head.html
+%{_libdir}/R/doc/html/*.jpg
+%dir %{_libdir}/R/doc/html/search
+%{_libdir}/R/doc/html/search/[A-Z]*
+%ghost %{_libdir}/R/doc/html/search/index.txt
+%ghost %{_libdir}/R/doc/html/packages.html
+%{_applnkdir}/Scientific/Numerics/*
%files recommended
%defattr(644,root,root,755)
-%attr(-,root,root) %{_libdir}/R/library/MASS
-%attr(-,root,root) %{_libdir}/R/library/class
-%attr(-,root,root) %{_libdir}/R/library/nnet
-%attr(-,root,root) %{_libdir}/R/library/spatial
-%attr(-,root,root) %doc VR
-%attr(-,root,root) %{_libdir}/R/library/KernSmooth
-%attr(-,root,root) %doc KernSmooth
-%attr(-,root,root) %{_libdir}/R/library/boot
-%attr(-,root,root) %doc boot
-%attr(-,root,root) %{_libdir}/R/library/cluster
-%attr(-,root,root) %doc cluster
-%attr(-,root,root) %{_libdir}/R/library/foreign
-%attr(-,root,root) %doc foreign
-%attr(-,root,root) %{_libdir}/R/library/mgcv
-%attr(-,root,root) %doc mgcv
-%attr(-,root,root) %{_libdir}/R/library/nlme
-%attr(-,root,root) %doc nlme
-%attr(-,root,root) %{_libdir}/R/library/rpart
-%attr(-,root,root) %doc rpart
-%attr(-,root,root) %{_libdir}/R/library/survival
-%attr(-,root,root) %doc survival
+%{_libdir}/R/library/MASS
+%{_libdir}/R/library/class
+%{_libdir}/R/library/nnet
+%{_libdir}/R/library/spatial
+%doc VR
+%{_libdir}/R/library/KernSmooth
+%doc KernSmooth
+%{_libdir}/R/library/boot
+%doc boot
+%{_libdir}/R/library/cluster
+%doc cluster
+%{_libdir}/R/library/foreign
+%doc foreign
+%{_libdir}/R/library/grid
+%doc grid
+%{_libdir}/R/library/lattice
+%doc lattice
+%{_libdir}/R/library/mgcv
+%doc mgcv
+%{_libdir}/R/library/nlme
+%doc nlme
+%{_libdir}/R/library/rpart
+%doc rpart
+%{_libdir}/R/library/survival
+%doc survival
%files contrib
%defattr(644,root,root,755)
-%attr(-,root,root) %{_libdir}/R/library/acepack
-%attr(-,root,root) %doc acepack
-%attr(-,root,root) %{_libdir}/R/library/bootstrap
-%attr(-,root,root) %doc bootstrap
-%attr(-,root,root) %{_libdir}/R/library/date
-%attr(-,root,root) %doc date
-%attr(-,root,root) %{_libdir}/R/library/e1071
-%attr(-,root,root) %doc e1071
-%attr(-,root,root) %{_libdir}/R/library/fracdiff
-%attr(-,root,root) %doc fracdiff
-%attr(-,root,root) %{_libdir}/R/library/gee
-%attr(-,root,root) %doc gee
-%attr(-,root,root) %{_libdir}/R/library/integrate
-%attr(-,root,root) %doc integrate
-%attr(-,root,root) %{_libdir}/R/library/leaps
-%attr(-,root,root) %doc leaps
-%attr(-,root,root) %{_libdir}/R/library/oz
-%attr(-,root,root) %doc oz
-%attr(-,root,root) %{_libdir}/R/library/polynom
-%attr(-,root,root) %doc polynom
-%attr(-,root,root) %{_libdir}/R/library/princurve
-%attr(-,root,root) %doc princurve
-%attr(-,root,root) %{_libdir}/R/library/quadprog
-%attr(-,root,root) %doc quadprog
-%attr(-,root,root) %{_libdir}/R/library/xgobi
-%attr(-,root,root) %doc xgobi
+%{_libdir}/R/library/acepack
+%doc acepack
+%{_libdir}/R/library/bootstrap
+%doc bootstrap
+%{_libdir}/R/library/date
+%doc date
+%{_libdir}/R/library/e1071
+%doc e1071
+%{_libdir}/R/library/fracdiff
+%doc fracdiff
+%{_libdir}/R/library/gee
+%doc gee
+%{_libdir}/R/library/integrate
+%doc integrate
+%{_libdir}/R/library/leaps
+%doc leaps
+%{_libdir}/R/library/oz
+%doc oz
+%{_libdir}/R/library/polynom
+%doc polynom
+%{_libdir}/R/library/princurve
+%doc princurve
+%{_libdir}/R/library/quadprog
+%doc quadprog
+%{_libdir}/R/library/xgobi
+%doc xgobi
%files mlbench
%defattr(644,root,root,755)
-%attr(-,root,root) %{_libdir}/R/library/mlbench
-%attr(-,root,root) %doc mlbench
+%{_libdir}/R/library/mlbench
+%doc mlbench
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