-Summary: A language for data analysis and graphics
-Name: R
-Version: 0.61.1
-Release: 3
-Source0: ftp.stat.math.ethz.ch:/R-CRAN/src/base/r-0_61_1.tgz
-Source1: ftp.stat.math.ethz.ch:/R-CRAN/src/contrib/mlbench_0.2-2.tar.gz
-Source2: ftp.stat.math.ethz.ch:/R-CRAN/src/contrib/acepack_1.0-2.tar.gz
-Source3: ftp.stat.math.ethz.ch:/R-CRAN/src/contrib/bootstrap_1.0-3.tar.gz
-Source4: ftp.stat.math.ethz.ch:/R-CRAN/src/contrib/class_VR5-4.tar.gz
-Source5: ftp.stat.math.ethz.ch:/R-CRAN/src/contrib/clus_1.0-2.tar.gz
-Source6: ftp.stat.math.ethz.ch:/R-CRAN/src/contrib/ctest_0.9-1.tar.gz
-Source7: ftp.stat.math.ethz.ch:/R-CRAN/src/contrib/date_1.0-3.tar.gz
-Source8: ftp.stat.math.ethz.ch:/R-CRAN/src/contrib/e1071_0.7-3.tar.gz
-Source9: ftp.stat.math.ethz.ch:/R-CRAN/src/contrib/fracdiff_1.0-2.tar.gz
-Source10: ftp.stat.math.ethz.ch:/R-CRAN/src/contrib/gee_3.13-2.tar.gz
-Source11: ftp.stat.math.ethz.ch:/R-CRAN/src/contrib/integrate_1.0-3.tar.gz
-Source12: ftp.stat.math.ethz.ch:/R-CRAN/src/contrib/jpn_1.0-1.tar.gz
-Source13: ftp.stat.math.ethz.ch:/R-CRAN/src/contrib/leaps_1.0-3.tar.gz
-Source14: ftp.stat.math.ethz.ch:/R-CRAN/src/contrib/nnet_VR5-3.tar.gz
-Source15: ftp.stat.math.ethz.ch:/R-CRAN/src/contrib/oz_1.0-1.tar.gz
-Source16: ftp.stat.math.ethz.ch:/R-CRAN/src/contrib/polynom_1.0-3.tar.gz
-Source17: ftp.stat.math.ethz.ch:/R-CRAN/src/contrib/ratetables_1.0-2.tar.gz
-Source18: ftp.stat.math.ethz.ch:/R-CRAN/src/contrib/rational_1.0-1.tar.gz
-Source19: ftp.stat.math.ethz.ch:/R-CRAN/src/contrib/spatial_VR5-2.tar.gz
-Source20: ftp.stat.math.ethz.ch:/R-CRAN/src/contrib/splines_2.0-1.tar.gz
-Source21: ftp.stat.math.ethz.ch:/R-CRAN/src/contrib/survival4_1.0-3.tar.gz
-Source22: ftp.stat.math.ethz.ch:/R-CRAN/src/contrib/xgobi_1.0-2.tar.gz
-Source23: ftp.stat.math.ethz.ch:/R-CRAN/src/contrib/principal.curve_1.0-2.tar.gz
-Source24: ftp.stat.math.ethz.ch:/R-CRAN/src/contrib/quadprog_1.0-2.tar.gz
-Patch0: R-0.61.rpm.patch3
-Copyright: gpl
-Group: Development/Languages
-Packager: Martyn Plummer <plummer@iarc.fr>
-URL: http://stat.auckland.ac.nz/r/r.html
-Provides: R-base R-contrib
-BuildRoot: /tmp/R
+#
+# Conditional build
+%bcond_without tcl # disable tcl support
+%bcond_without tests # do not run "make check"
+#
+# NOTE:
+# - /etc/localtime must be present for tests to work
+#
+# TODO:
+# - 755 for %{_libdir}/R/library/*/libs/*.so
+# - %lang( ) for %{_libdir}/R/library/*/po/* dirs
+# - script for rpm to autoprovides/autorequires R internals
+#
+%include /usr/lib/rpm/macros.perl
+Summary: A language for data analysis and graphics
+Summary(pl.UTF-8): Język do analizy danych oraz grafiki
+Name: R
+Version: 2.14.0
+Release: 1
+License: Mixed (distributable), mostly GPL v2+
+Group: Development/Languages
+# CRAN master site: ftp://cran.r-project.org/pub/R/src/
+Source0: ftp://stat.ethz.ch/R-CRAN/src/base/R-2/%{name}-%{version}.tar.gz
+# Source0-md5: 98cf8fe74e512e1061caf1ee0c2043a8
+Source1: %{name}.desktop
+Source2: %{name}.xpm
+URL: http://www.r-project.org/
+BuildRequires: autoconf >= 2.62
+BuildRequires: automake
+BuildRequires: blas-devel >= 3.2.2-2
+BuildRequires: bzip2-devel >= 1.0.6
+BuildRequires: cairo-devel >= 1.6
+BuildRequires: gcc-fortran
+BuildRequires: gettext-devel
+BuildRequires: lapack-devel >= 3.2.2-2
+BuildRequires: libicu-devel
+BuildRequires: libjpeg-devel >= 6b
+BuildRequires: libpng-devel >= 1.2.7
+BuildRequires: libstdc++-devel
+BuildRequires: libtiff-devel
+BuildRequires: libtool >= 2:2.0
+BuildRequires: libxml2-devel >= 2.6.26
+BuildRequires: pango-devel
+BuildRequires: pcre-devel >= 7.6
+BuildRequires: perl-base >= 1:5.6
+BuildRequires: pkgconfig
+BuildRequires: readline-devel
+BuildRequires: rpm-perlprov
+%{?with_tcl:BuildRequires: tcl-devel >= 8.4}
+BuildRequires: tetex-dvips
+BuildRequires: tetex-latex
+BuildRequires: tetex-pdftex
+BuildRequires: texinfo-texi2dvi >= 4.7
+%{?with_tcl:BuildRequires: tk-devel >= 8.4}
+BuildRequires: xorg-lib-libX11-devel
+BuildRequires: xorg-lib-libXmu-devel
+BuildRequires: xorg-lib-libXt-devel
+BuildRequires: xz-devel >= 4.999
+BuildRequires: zip
+BuildRequires: zlib-devel >= 1.2.3
+#Requires: lpr
+Requires(post): perl-base
+Requires(post): textutils
+Requires: blas >= 3.2.2-2
+Suggests: rkward
+Obsoletes: R-base
+Obsoletes: R-contrib
+Obsoletes: R-recommended
+BuildRoot: %{tmpdir}/%{name}-%{version}-root-%(id -u -n)
%description
A system for statistical computation and graphics. R consists of a
script files.
The design of R has been heavily influenced by two existing languages:
-Becker, Chambers & Wilks' S and Sussman's Scheme. Whereas the resulting
-language is very similar in appearance to S, the underlying implementation
-and semantics are derived from Scheme.
-
-%package base
-Summary: The R base distribution
-Group: Development/Languages
-Version: 0.61.1
-Conflicts: R-contrib < 1998.1.1
-Provides: R-acepack R-bootstrap R-class R-clus R-ctest R-date R-e1071
-Provides: R-fracdiff R-gee R-integrate R-jpn R-leaps R-mlbench R-nnet R-oz
-Provides: R-polynom R-principal.curve R-quadprog R-ratetables R-rational
-Provides: R-spatial R-splines R-survival4 R-xgobi
-
-%description base
-R is a language and run-time environment for carrying out interactive
-statistical data analysis. It is not entirely dissimilar to the S language
-developed at AT&T Bell Laboratories (and now Lucent Technologies). Indeed,
-S users will find the environment quite familiar and a good deal of S
-software will run without change under R.
-
-%package contrib
-Summary: contributed packages for the R language
-Group: Development/Languages
-Copyright: Mixed
-URL: http://www.ci.tuwien.ac.at/R/
-Version: 1998.01.22
-Release: 3
-Requires: R-base >= 0.60
+Becker, Chambers & Wilks' S and Sussman's Scheme. Whereas the
+resulting language is very similar in appearance to S, the underlying
+implementation and semantics are derived from Scheme.
-%description contrib
-Packages which extend the capabilities of the R base distribution
-and are distributed on the Comprehensive R Archive Network (CRAN).
+%description -l pl.UTF-8
+System do obliczeń statystycznych i grafiki. R składa się z języka
+oraz środowiska uruchomieniowego z grafiką, debuggerem, dostępem do
+niektórych funkcji systemowych oraz możliwością uruchamiania programów
+zapisanych w skryptach.
-%package mlbench
-Summary: Machine learning benchmarks
-Group: Development/Languages
-Copyright: GPL
-URL: http://www.ics.uci.edu/~mlearn/MLRepository.html
-Version: 0.2.2
-Release: 3
-Requires: R-base >= 0.60
-
-%description mlbench
-R package which contains a collection of real-world datasets and
-functions for creating artificial datasets that work as benchmarks
-for machine learning methods.
+Język R był zainspirowany dwoma istniejącymi językami: S (Beckera,
+Chambersa i Wilksa) oraz Scheme (Sussmana). R jest podobny do S, ale
+implementacja i semantyka wywodzi się ze Scheme.
%prep
-%setup -c -n R-cran -T -b 2
-%setup -c -n R-cran -T -D -b 3
-%setup -c -n R-cran -T -D -b 4
-%setup -c -n R-cran -T -D -b 5
-%setup -c -n R-cran -T -D -b 6
-%setup -c -n R-cran -T -D -b 7
-%setup -c -n R-cran -T -D -b 8
-%setup -c -n R-cran -T -D -b 9
-%setup -c -n R-cran -T -D -b 10
-%setup -c -n R-cran -T -D -b 11
-%setup -c -n R-cran -T -D -b 12
-%setup -c -n R-cran -T -D -b 13
-%setup -c -n R-cran -T -D -b 14
-%setup -c -n R-cran -T -D -b 15
-%setup -c -n R-cran -T -D -b 16
-%setup -c -n R-cran -T -D -b 17
-%setup -c -n R-cran -T -D -b 18
-%setup -c -n R-cran -T -D -b 19
-%setup -c -n R-cran -T -D -b 20
-%setup -c -n R-cran -T -D -b 21
-%setup -c -n R-cran -T -D -b 22
-%setup -c -n R-cran -T -D -b 23
-%setup -c -n R-cran -T -D -b 24
-%setup
-%setup -T -D -a 1
-%patch0 -p1
-# These files have the path for PERL hard-coded as /usr/local/bin/perl
-# We need to remove them to avoid dependency problems
-rm ./doc/keyword-test.orig ./etc/undoc/R-funs.orig ./etc/undoc/extrExamp.orig
+%setup -q
%build
-
-make
-make help
-make html
-make clean
-make acclean
-
-# Install contrib packages
-#
-RHOME=`pwd`;export RHOME
-cd ../R-cran
-for pkg in `ls`
-do
- ${RHOME}/etc/INSTALL -latex ${pkg}
-done
-cd ${RHOME}
-
-# Install mlbench
-#
-${RHOME}/etc/INSTALL mlbench
-
-#Remove old template files.
-#
-for oldinfile in `find . -name '*.in' -print`
-do
- rm ${oldinfile}
-done
-
-# Gather documentation from contrib packages in one directory
-# Assume that anything not in one of the standard directories is
-# documentation, and copy it.
-#
-mkdir ${RHOME}/contrib
-cd ${RPM_BUILD_DIR}/R-cran
-for pkg in `ls`; do
- if [ -d ${pkg} ]; then
- mkdir ${RHOME}/${pkg}
- for docfile in `ls ${pkg}`; do
- case $docfile in
- INDEX) ;;
- TITLE) ;;
- R) ;;
- man) ;;
- src) ;;
- src-c) ;;
- data) ;;
- *) cp -R -P ${pkg}/${docfile} ${RHOME};;
- esac
- done
- fi
-done
-cd ${RHOME}
-
+%{__aclocal} -I m4
+%{__autoconf}
+install -d build
+cd build
+../%configure \
+ --enable-R-shlib \
+ --enable-largefile \
+ --with-ICU \
+ --with-blas \
+ --with-cairo \
+ --with-jpeglib \
+ --with-lapack \
+ --with-libpng \
+ --with-readline \
+ --with-recommended-packages \
+ --with-system-bzlib \
+ --with-system-pcre \
+ --with-system-xz \
+ --with-system-zlib \
+ --with%{!?with_tcl:out}-tcltk \
+ --with-x
+
+%{__make}
+
+%if %{with tests}
+%{__make} check
+%endif
+
+%{__make} docs pdf info
%install
-install -d ${RPM_BUILD_ROOT}/usr/man/man1
-install R.1 ${RPM_BUILD_ROOT}/usr/man/man1/
-install -d ${RPM_BUILD_ROOT}/usr/lib/R
-cp -R afm bin cmd demos doc etc html include library ${RPM_BUILD_ROOT}/usr/lib/R
-install -d ${RPM_BUILD_ROOT}/usr/bin
-install -m 755 bin/R ${RPM_BUILD_ROOT}/usr/bin/R
-
-%files base
-%attr(-,root,root) /usr/man/man1/R.1
-%attr(-,root,root) /usr/bin/R
-%attr(-,root,root) %dir /usr/lib/R
-%attr(-,root,root) /usr/lib/R/afm
-%attr(-,root,root) /usr/lib/R/bin
-%attr(-,root,root) /usr/lib/R/cmd
-%attr(-,root,root) /usr/lib/R/demos
-%attr(-,root,root) /usr/lib/R/etc
-%attr(-,root,root) /usr/lib/R/html
-%attr(-,root,root) /usr/lib/R/include
-%attr(-,root,root) %dir /usr/lib/R/library
-%attr(-,root,root) /usr/lib/R/library/base/
-%attr(-,root,root) /usr/lib/R/library/eda/
-%attr(-,root,root) /usr/lib/R/library/mva/
-%attr(-,root,root) /usr/lib/R/library/stepfun/
-%attr(-,root,root) %doc CHANGES COPYING COPYRIGHTS MIRROR-SITES PROJECTS README RESOURCES TASKS
-
-%files contrib
-%attr(-,root,root) /usr/lib/R/library/acepack
-%attr(-,root,root) %doc acepack
-%attr(-,root,root) /usr/lib/R/library/bootstrap
-%attr(-,root,root) %doc bootstrap
-%attr(-,root,root) /usr/lib/R/library/class
-%attr(-,root,root) %doc class
-%attr(-,root,root) /usr/lib/R/library/clus
-%attr(-,root,root) %doc clus
-%attr(-,root,root) /usr/lib/R/library/ctest
-%attr(-,root,root) %doc ctest
-%attr(-,root,root) /usr/lib/R/library/date
-%attr(-,root,root) %doc date
-%attr(-,root,root) /usr/lib/R/library/e1071
-%attr(-,root,root) %doc e1071
-%attr(-,root,root) /usr/lib/R/library/fracdiff
-%attr(-,root,root) %doc fracdiff
-%attr(-,root,root) /usr/lib/R/library/gee
-%attr(-,root,root) %doc gee
-%attr(-,root,root) /usr/lib/R/library/integrate
-%attr(-,root,root) %doc integrate
-%attr(-,root,root) /usr/lib/R/library/jpn
-%attr(-,root,root) %doc jpn
-%attr(-,root,root) /usr/lib/R/library/leaps
-%attr(-,root,root) %doc leaps
-%attr(-,root,root) /usr/lib/R/library/nnet
-%attr(-,root,root) %doc nnet
-%attr(-,root,root) /usr/lib/R/library/oz
-%attr(-,root,root) %doc oz
-%attr(-,root,root) /usr/lib/R/library/polynom
-%attr(-,root,root) %doc polynom
-%attr(-,root,root) /usr/lib/R/library/ratetables
-%attr(-,root,root) %doc ratetables
-%attr(-,root,root) /usr/lib/R/library/rational
-%attr(-,root,root) %doc rational
-%attr(-,root,root) /usr/lib/R/library/spatial
-%attr(-,root,root) %doc spatial
-%attr(-,root,root) /usr/lib/R/library/splines
-%attr(-,root,root) %doc splines
-%attr(-,root,root) /usr/lib/R/library/survival4
-%attr(-,root,root) %doc survival4
-%attr(-,root,root) /usr/lib/R/library/xgobi
-%attr(-,root,root) %doc xgobi
-%attr(-,root,root) /usr/lib/R/library/principal.curve
-%attr(-,root,root) %doc principal.curve
-%attr(-,root,root) /usr/lib/R/library/quadprog
-%attr(-,root,root) %doc quadprog
-
-%files mlbench
-%attr(-,root,root) /usr/lib/R/library/mlbench
-%attr(-,root,root) %doc mlbench/COPYRIGHT
-%attr(-,root,root) %doc mlbench/ChangeLog
-%attr(-,root,root) %doc mlbench/README
+rm -rf $RPM_BUILD_ROOT
+install -d $RPM_BUILD_ROOT{%{_bindir},%{_mandir}/man1,%{_libdir}/R,%{_includedir},%{_desktopdir},%{_pixmapsdir}}
+
+%{__make} -C build -j1 install \
+ DESTDIR=$RPM_BUILD_ROOT
+
+install %{SOURCE1} $RPM_BUILD_ROOT%{_desktopdir}
+install %{SOURCE2} $RPM_BUILD_ROOT%{_pixmapsdir}
+
+mv $RPM_BUILD_ROOT%{_libdir}/R/lib/libR*.so $RPM_BUILD_ROOT%{_libdir}
+mv $RPM_BUILD_ROOT%{_libdir}/%{name}/include $RPM_BUILD_ROOT%{_includedir}/R
+ln -sf %{_includedir}/R $RPM_BUILD_ROOT%{_libdir}/R/include
+
+gen_lang() {
+ dir="$1"
+ for d in $RPM_BUILD_ROOT${dir}/* ; do
+ bd=$(basename $d)
+ lang="${bd%@*}"
+ echo "%lang($lang) ${dir}/${bd}"
+ done
+}
+
+gen_lang %{_libdir}/R/share/locale > R.files
+for moddir in $RPM_BUILD_ROOT%{_libdir}/R/library/* ; do
+ module=$(basename $moddir)
+ echo "%dir %{_libdir}/R/library/${module}"
+ for f in $moddir/* ; do
+ bf=$(basename $f)
+ case "$bf" in
+ po)
+ echo "%dir %{_libdir}/R/library/${module}/po"
+ gen_lang %{_libdir}/R/library/${module}/po
+ ;;
+ libs)
+ echo "%dir %{_libdir}/R/library/${module}/libs"
+ echo "%attr(755,root,root) %{_libdir}/R/library/${module}/libs/*.so"
+ ;;
+ *)
+ echo "%{_libdir}/R/library/${module}/${bf}"
+ ;;
+ esac
+ done
+done >> R.files
%clean
-# Tidy up after build. We have to be quite careful here in case some
-# idiot (me) uses a build root of /. This leaves the directory structure
-# in place but removes the files owned by R.
-rm -f ${RPM_BUILD_ROOT}/usr/man/man1/R.1
-rm -f ${RPM_BUILD_ROOT}/usr/bin/R
-rm -rf ${RPM_BUILD_ROOT}/usr/lib/R
-rm -rf ${RPM_BUILD_ROOT}/usr/doc/R-*
-
-%post base
-(cd /usr/lib/R/library; cat */TITLE > LibIndex; ../etc/build-htmlpkglist)
-
-%preun base
-# These files are not owned by any package, so we have to remove them
-# but only if this is the last version of R-base on the system.
-#
-if [ "$1" = 0 ];
-then
- rm -f /usr/lib/R/library/LibIndex
- rm -f /usr/lib/R/library/index.html
-fi
-
-%post contrib
-(cd /usr/lib/R/library; cat */TITLE > LibIndex; ../etc/build-htmlpkglist)
-
-%postun contrib
-(cd /usr/lib/R/library; cat */TITLE > LibIndex; ../etc/build-htmlpkglist)
-
-%post mlbench
-(cd /usr/lib/R/library; cat */TITLE > LibIndex; ../etc/build-htmlpkglist)
-
-%postun mlbench
-(cd /usr/lib/R/library; cat */TITLE > LibIndex; ../etc/build-htmlpkglist)
+rm -rf $RPM_BUILD_ROOT
+
+%post -p /sbin/ldconfig
+%postun -p /sbin/ldconfig
+
+%files -f R.files
+%defattr(644,root,root,755)
+%doc NEWS README doc/{AUTHORS,COPYRIGHTS,FAQ,RESOURCES,THANKS}
+%attr(755,root,root) %{_bindir}/R
+%attr(755,root,root) %{_bindir}/Rscript
+%attr(755,root,root) %{_libdir}/libR.so
+%dir %{_libdir}/R
+%{_libdir}/R/COPYING
+%{_libdir}/R/NEWS
+%{_libdir}/R/SVN-REVISION
+%attr(755,root,root) %{_libdir}/R/bin
+# %{_libdir}/R/doc %except %{_libdir}/R/doc/html/{packages.html,search/index.txt}
+%dir %{_libdir}/R/doc
+%{_libdir}/R/doc/[KRm]*
+%dir %{_libdir}/R/doc/html
+%{_libdir}/R/doc/html/*.css
+%{_libdir}/R/doc/html/[Ra-lr-u]*.html
+%{_libdir}/R/doc/html/packages-head*.html
+%{_libdir}/R/doc/html/*.jpg
+%ghost %{_libdir}/R/doc/html/packages.html
+%{_libdir}/R/etc
+%{_libdir}/R/include
+%dir %{_libdir}/R/library
+# library files list is autogenerated (see R.files above)
+%attr(755,root,root) %{_libdir}/R/modules
+%dir %{_libdir}/R/share
+%{_libdir}/R/share/R
+%{_libdir}/R/share/encodings
+%{_libdir}/R/share/java
+%{_libdir}/R/share/licenses
+%dir %{_libdir}/R/share/locale
+# locale files list is autogenerated (see R.files above)
+%{_libdir}/R/share/make
+%{_libdir}/R/share/sh
+%{_libdir}/R/share/texmf
+%{_desktopdir}/R.desktop
+%{_pixmapsdir}/R.xpm
+%{_includedir}/R
+%{_pkgconfigdir}/libR.pc
+%{_mandir}/man1/R.1*
+%{_mandir}/man1/Rscript*
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