projects / packages / R-Biostrings.git / blame
| Commit | Line | Data |
|---|---|---|
| 86265ea0 JR |
1 | %define packname Biostrings |
| 2 | ||
| 3 | Summary: String objects representing biological sequences | |
| 4 | Name: R-%{packname} | |
| 716ba8cd | 5 | Version: 2.30.1 |
| 86265ea0 JR |
6 | Release: 1 |
| 7 | License: Artistic 2.0 | |
| 8 | Group: Applications/Engineering | |
| 9 | Source0: http://bioconductor.org/packages/release/bioc/src/contrib/%{packname}_%{version}.tar.gz | |
| 716ba8cd | 10 | # Source0-md5: acf4d4047855f20096e751cf5fadbf5e |
| 86265ea0 JR |
11 | URL: http://bioconductor.org/packages/release/bioc/html/Biostrings.html |
| 12 | BuildRequires: R | |
| 13 | BuildRequires: R-Biobase | |
| 14 | BuildRequires: R-IRanges-devel >= 1.6.6 | |
| 15 | BuildRequires: texlive-latex | |
| 16 | Requires: R | |
| 17 | Requires: R-Biobase | |
| 18 | Requires: R-IRanges >= 1.6.6 | |
| 19 | BuildRoot: %{tmpdir}/%{name}-%{version}-root-%(id -u -n) | |
| 20 | ||
| 21 | %description | |
| 22 | Memory efficient string containers, string matching algorithms, and | |
| 23 | other utilities, for fast manipulation of large biological sequences | |
| 24 | or set of sequences. | |
| 25 | ||
| 26 | %package devel | |
| 27 | Summary: Development files for %{name} | |
| 28 | Group: Development/Libraries | |
| 29 | Requires: %{name} = %{version}-%{release} | |
| 30 | ||
| 31 | %description devel | |
| 32 | The %{name}-devel package contains libraries and header files for | |
| 33 | developing applications that use %{name}. | |
| 34 | ||
| 35 | %prep | |
| 36 | %setup -q -c -n %{packname} | |
| 37 | ||
| 38 | %build | |
| 39 | ||
| 40 | %install | |
| 41 | rm -rf $RPM_BUILD_ROOT | |
| 42 | install -d $RPM_BUILD_ROOT%{_libdir}/R/library | |
| 43 | ||
| 44 | R CMD INSTALL %{packname} -l $RPM_BUILD_ROOT%{_libdir}/R/library | |
| 45 | ||
| 46 | %clean | |
| 47 | rm -rf $RPM_BUILD_ROOT | |
| 48 | ||
| 49 | %files | |
| 50 | %defattr(644,root,root,755) | |
| 51 | %dir %{_libdir}/R/library/%{packname}/ | |
| 52 | %doc %{_libdir}/R/library/%{packname}/doc | |
| 53 | %doc %{_libdir}/R/library/%{packname}/DESCRIPTION | |
| 54 | %doc %{_libdir}/R/library/%{packname}/html | |
| 55 | %doc %{_libdir}/R/library/%{packname}/NEWS | |
| 56 | %{_libdir}/R/library/%{packname}/help | |
| 57 | %{_libdir}/R/library/%{packname}/R | |
| 58 | %{_libdir}/R/library/%{packname}/extdata | |
| 59 | %{_libdir}/R/library/%{packname}/data | |
| 60 | %{_libdir}/R/library/%{packname}/libs | |
| 61 | %{_libdir}/R/library/%{packname}/Meta | |
| 62 | %{_libdir}/R/library/%{packname}/UnitTests | |
| 63 | %{_libdir}/R/library/%{packname}/INDEX | |
| 64 | %{_libdir}/R/library/%{packname}/NAMESPACE | |
| 65 | ||
| 66 | %files devel | |
| 67 | %{_libdir}/R/library/%{packname}/include |