R-simpleaffy.spec

   1 %define         packname        simpleaffy
   2
   3 Summary:        Very simple high level analysis of Affymetrix data
   4 Name:           R-%{packname}
   5 Version:        2.38.0
   6 Release:        1
   7 License:        GPL v2+
   8 Group:          Applications/Engineering
   9 Source0:        http://www.bioconductor.org/packages/release/bioc/src/contrib/%{packname}_%{version}.tar.gz
  10 # Source0-md5:  68fbe75b4e04265c0fe43610afdeff04
  11 URL:            http://www.bioconductor.org/packages/release/bioc/html/simpleaffy.html
  12 BuildRequires:  R-Biobase
  13 BuildRequires:  R
  14 BuildRequires:  R-BiocGenerics
  15 BuildRequires:  R-affy
  16 BuildRequires:  R-genefilter
  17 BuildRequires:  R-gcrma
  18 BuildRequires:  texlive-latex
  19 Requires:       R-Biobase
  20 Requires:       R
  21 Requires:       R-BiocGenerics
  22 Requires:       R-affy
  23 Requires:       R-genefilter
  24 Requires:       R-gcrma
  25 BuildRoot:      %{tmpdir}/%{name}-%{version}-root-%(id -u -n)
  26
  27 %description
  28 Provides high level functions for reading Affy .CEL files, phenotypic
  29 data, and then computing simple things with it, such as t-tests, fold
  30 changes and the like. Makes heavy use of the affy library. Also has
  31 some basic scatter plot functions and mechanisms for generating high
  32 resolution journal figures.
  33
  34 %prep
  35 %setup -q -c -n %{packname}
  36
  37 %build
  38
  39 %install
  40 rm -rf $RPM_BUILD_ROOT
  41 install -d $RPM_BUILD_ROOT%{_libdir}/R/library
  42
  43 %{_bindir}/R CMD INSTALL -l $RPM_BUILD_ROOT%{_libdir}/R/library %{packname}
  44
  45 %clean
  46 rm -rf $RPM_BUILD_ROOT
  47
  48 %files
  49 %defattr(644,root,root,755)
  50 %doc %{_libdir}/R/library/%{packname}/DESCRIPTION
  51 %doc %{_libdir}/R/library/%{packname}/doc
  52 %doc %{_libdir}/R/library/%{packname}/html
  53 %dir %{_libdir}/R/library/%{packname}
  54 %{_libdir}/R/library/%{packname}/Meta
  55 %{_libdir}/R/library/%{packname}/NAMESPACE
  56 %{_libdir}/R/library/%{packname}/INDEX
  57 %{_libdir}/R/library/%{packname}/R
  58 %{_libdir}/R/library/%{packname}/help
  59 %{_libdir}/R/library/%{packname}/data
  60 %{_libdir}/R/library/%{packname}/extdata
  61 %dir %{_libdir}/R/library/%{packname}/libs
  62 %attr(755,root,root) %{_libdir}/R/library/%{packname}/libs/%{packname}.so