projects / packages / R-simpleaffy.git / blame
| Commit | Line | Data |
|---|---|---|
| 06d58039 JR |
1 | %define packname simpleaffy |
| 2 | ||
| 3 | Summary: Very simple high level analysis of Affymetrix data | |
| 4 | Name: R-%{packname} | |
| c85f9718 | 5 | Version: 2.38.0 |
| 06d58039 | 6 | Release: 1 |
| e3899d30 | 7 | License: GPL v2+ |
| 06d58039 JR |
8 | Group: Applications/Engineering |
| 9 | Source0: http://www.bioconductor.org/packages/release/bioc/src/contrib/%{packname}_%{version}.tar.gz | |
| c85f9718 | 10 | # Source0-md5: 68fbe75b4e04265c0fe43610afdeff04 |
| 06d58039 JR |
11 | URL: http://www.bioconductor.org/packages/release/bioc/html/simpleaffy.html |
| 12 | BuildRequires: R-Biobase | |
| 13 | BuildRequires: R | |
| 14 | BuildRequires: R-BiocGenerics | |
| 15 | BuildRequires: R-affy | |
| 16 | BuildRequires: R-genefilter | |
| 17 | BuildRequires: R-gcrma | |
| 18 | BuildRequires: texlive-latex | |
| 19 | Requires: R-Biobase | |
| 20 | Requires: R | |
| 21 | Requires: R-BiocGenerics | |
| 22 | Requires: R-affy | |
| 23 | Requires: R-genefilter | |
| 24 | Requires: R-gcrma | |
| 25 | BuildRoot: %{tmpdir}/%{name}-%{version}-root-%(id -u -n) | |
| 26 | ||
| 27 | %description | |
| 28 | Provides high level functions for reading Affy .CEL files, phenotypic | |
| 29 | data, and then computing simple things with it, such as t-tests, fold | |
| 30 | changes and the like. Makes heavy use of the affy library. Also has | |
| 31 | some basic scatter plot functions and mechanisms for generating high | |
| 32 | resolution journal figures. | |
| 33 | ||
| 34 | %prep | |
| 35 | %setup -q -c -n %{packname} | |
| 36 | ||
| 37 | %build | |
| 38 | ||
| 39 | %install | |
| 40 | rm -rf $RPM_BUILD_ROOT | |
| 41 | install -d $RPM_BUILD_ROOT%{_libdir}/R/library | |
| 42 | ||
| 43 | %{_bindir}/R CMD INSTALL -l $RPM_BUILD_ROOT%{_libdir}/R/library %{packname} | |
| 44 | ||
| 45 | %clean | |
| 46 | rm -rf $RPM_BUILD_ROOT | |
| 47 | ||
| 48 | %files | |
| 49 | %defattr(644,root,root,755) | |
| 50 | %doc %{_libdir}/R/library/%{packname}/DESCRIPTION | |
| 51 | %doc %{_libdir}/R/library/%{packname}/doc | |
| 52 | %doc %{_libdir}/R/library/%{packname}/html | |
| 53 | %dir %{_libdir}/R/library/%{packname} | |
| 54 | %{_libdir}/R/library/%{packname}/Meta | |
| 55 | %{_libdir}/R/library/%{packname}/NAMESPACE | |
| 56 | %{_libdir}/R/library/%{packname}/INDEX | |
| 57 | %{_libdir}/R/library/%{packname}/R | |
| 58 | %{_libdir}/R/library/%{packname}/help | |
| 59 | %{_libdir}/R/library/%{packname}/data | |
| 60 | %{_libdir}/R/library/%{packname}/extdata | |
| 61 | %dir %{_libdir}/R/library/%{packname}/libs | |
| 62 | %attr(755,root,root) %{_libdir}/R/library/%{packname}/libs/%{packname}.so |