]>
Commit | Line | Data |
---|---|---|
06d58039 JR |
1 | %define packname simpleaffy |
2 | ||
3 | Summary: Very simple high level analysis of Affymetrix data | |
4 | Name: R-%{packname} | |
5 | Version: 2.34.0 | |
6 | Release: 1 | |
e3899d30 | 7 | License: GPL v2+ |
06d58039 JR |
8 | Group: Applications/Engineering |
9 | Source0: http://www.bioconductor.org/packages/release/bioc/src/contrib/%{packname}_%{version}.tar.gz | |
10 | # Source0-md5: 63e0aa6b2b1737ee748cd55f646a8e80 | |
11 | URL: http://www.bioconductor.org/packages/release/bioc/html/simpleaffy.html | |
12 | BuildRequires: R-Biobase | |
13 | BuildRequires: R | |
14 | BuildRequires: R-BiocGenerics | |
15 | BuildRequires: R-affy | |
16 | BuildRequires: R-genefilter | |
17 | BuildRequires: R-gcrma | |
18 | BuildRequires: texlive-latex | |
19 | Requires: R-Biobase | |
20 | Requires: R | |
21 | Requires: R-BiocGenerics | |
22 | Requires: R-affy | |
23 | Requires: R-genefilter | |
24 | Requires: R-gcrma | |
25 | BuildRoot: %{tmpdir}/%{name}-%{version}-root-%(id -u -n) | |
26 | ||
27 | %description | |
28 | Provides high level functions for reading Affy .CEL files, phenotypic | |
29 | data, and then computing simple things with it, such as t-tests, fold | |
30 | changes and the like. Makes heavy use of the affy library. Also has | |
31 | some basic scatter plot functions and mechanisms for generating high | |
32 | resolution journal figures. | |
33 | ||
34 | %prep | |
35 | %setup -q -c -n %{packname} | |
36 | ||
37 | %build | |
38 | ||
39 | %install | |
40 | rm -rf $RPM_BUILD_ROOT | |
41 | install -d $RPM_BUILD_ROOT%{_libdir}/R/library | |
42 | ||
43 | %{_bindir}/R CMD INSTALL -l $RPM_BUILD_ROOT%{_libdir}/R/library %{packname} | |
44 | ||
45 | %clean | |
46 | rm -rf $RPM_BUILD_ROOT | |
47 | ||
48 | %files | |
49 | %defattr(644,root,root,755) | |
50 | %doc %{_libdir}/R/library/%{packname}/DESCRIPTION | |
51 | %doc %{_libdir}/R/library/%{packname}/doc | |
52 | %doc %{_libdir}/R/library/%{packname}/html | |
53 | %dir %{_libdir}/R/library/%{packname} | |
54 | %{_libdir}/R/library/%{packname}/Meta | |
55 | %{_libdir}/R/library/%{packname}/NAMESPACE | |
56 | %{_libdir}/R/library/%{packname}/INDEX | |
57 | %{_libdir}/R/library/%{packname}/R | |
58 | %{_libdir}/R/library/%{packname}/help | |
59 | %{_libdir}/R/library/%{packname}/data | |
60 | %{_libdir}/R/library/%{packname}/extdata | |
61 | %dir %{_libdir}/R/library/%{packname}/libs | |
62 | %attr(755,root,root) %{_libdir}/R/library/%{packname}/libs/%{packname}.so |