R-makecdfenv.spec

   1 %define         packname        makecdfenv
   2
   3 Summary:        CDF Environment Maker
   4 Name:           R-%{packname}
   5 Version:        1.38.0
   6 Release:        1
   7 License:        LGPL v2+
   8 Group:          Applications/Engineering
   9 Source0:        http://bioconductor.org/packages/release/bioc/src/contrib/%{packname}_%{version}.tar.gz
  10 # Source0-md5:  3f2338fe3351eaa7d8a86faa5223de0c
  11 Patch0:         bogus-deps.patch
  12 URL:            http://bioconductor.org/packages/release/bioc/html/makecdfenv.html
  13 BuildRequires:  R
  14 BuildRequires:  R-Biobase
  15 BuildRequires:  R-affy
  16 BuildRequires:  R-affyio
  17 BuildRequires:  texlive-latex
  18 BuildRequires:  zlib-devel
  19 Requires:       R
  20 Requires:       R-Biobase
  21 Requires:       R-affy
  22 Requires:       R-affyio
  23 BuildRoot:      %{tmpdir}/%{name}-%{version}-root-%(id -u -n)
  24
  25 %description
  26 This package has two functions. One reads a Affymetrix chip
  27 description file (CDF) and creates a hash table environment containing
  28 the location/probe set membership mapping. The other creates a package
  29 that automatically loads that environment.
  30
  31 %prep
  32 %setup -q -c -n %{packname}
  33 %patch0 -p1
  34
  35 %build
  36 R CMD build %{packname}
  37
  38 %install
  39 rm -rf $RPM_BUILD_ROOT
  40 install -d $RPM_BUILD_ROOT%{_libdir}/R/library
  41
  42 R CMD INSTALL %{packname} -l $RPM_BUILD_ROOT%{_libdir}/R/library
  43
  44 %clean
  45 rm -rf $RPM_BUILD_ROOT
  46
  47 %files
  48 %defattr(644,root,root,755)
  49 %dir %{_libdir}/R/library/%{packname}
  50 %doc %{_libdir}/R/library/%{packname}/doc
  51 %doc %{_libdir}/R/library/%{packname}/html
  52 %doc %{_libdir}/R/library/%{packname}/DESCRIPTION
  53 %{_libdir}/R/library/%{packname}/INDEX
  54 %{_libdir}/R/library/%{packname}/NAMESPACE
  55 %{_libdir}/R/library/%{packname}/Code
  56 %{_libdir}/R/library/%{packname}/Meta
  57 %{_libdir}/R/library/%{packname}/extdata
  58 %{_libdir}/R/library/%{packname}/R
  59 %{_libdir}/R/library/%{packname}/help
  60 %dir %{_libdir}/R/library/%{packname}/libs
  61 %attr(755,root,root) %{_libdir}/R/library/%{packname}/libs/makecdfenv.so