[packages/R-biovizBase.git] / R-biovizBase.spec

%define		packname	biovizBase

Summary:	Basic graphic utilities for visualization of genomic data
Name:		R-%{packname}
Version:	1.10.4
Release:	1
License:	Artistic 2.0
Group:		X11/Applications
Source0:	http://www.bioconductor.org/packages/release/bioc/src/contrib/%{packname}_%{version}.tar.gz
# Source0-md5:	c9f2652887977e5283bcbb6b9e30b14a
URL:		http://www.bioconductor.org/packages/release/bioc/html/biovizBase.html
BuildRequires:	R
BuildRequires:	R-cran-scales
BuildRequires:	R-cran-Hmisc
BuildRequires:	R-cran-RColorBrewer
BuildRequires:	R-cran-dichromat
BuildRequires:	R-GenomicRanges
BuildRequires:	R-Biostrings
BuildRequires:	R-Rsamtools
BuildRequires:	R-GenomicFeatures
BuildRequires:	texlive-latex
Requires:	R
Requires:	R-cran-scales
Requires:	R-cran-Hmisc
Requires:	R-cran-RColorBrewer
Requires:	R-cran-dichromat
Requires:	R-GenomicRanges
Requires:	R-Biostrings
Requires:	R-Rsamtools
Requires:	R-GenomicFeatures
BuildRoot:	%{tmpdir}/%{name}-%{version}-root-%(id -u -n)

%description
The biovizBase package is designed to provide a set of utilities,
color schemes and conventions for genomic data. It serves as the base
for various high-level packages for biological data visualization.
This saves development effort and encourages consistency.

%prep
%setup -c -q -n %{packname}

%build

%install
rm -rf $RPM_BUILD_ROOT
install -d $RPM_BUILD_ROOT%{_libdir}/R/library

%{_bindir}/R CMD INSTALL %{packname} -l $RPM_BUILD_ROOT%{_libdir}/R/library

%clean
rm -rf $RPM_BUILD_ROOT

%files
%defattr(644,root,root,755)
%dir %{_libdir}/R/library/%{packname}/
%doc %{_libdir}/R/library/%{packname}/doc/
%doc %{_libdir}/R/library/%{packname}/html/
%doc %{_libdir}/R/library/%{packname}/DESCRIPTION
%doc %{_libdir}/R/library/%{packname}/NEWS
%{_libdir}/R/library/%{packname}/NAMESPACE
%{_libdir}/R/library/%{packname}/INDEX
%{_libdir}/R/library/%{packname}/Meta/
%{_libdir}/R/library/%{packname}/R/
%{_libdir}/R/library/%{packname}/help/
%{_libdir}/R/library/%{packname}/data/
%{_libdir}/R/library/%{packname}/examples/
%{_libdir}/R/library/%{packname}/extdata/
%dir %{_libdir}/R/library/%{packname}/libs
%attr(755,root,root) %{_libdir}/R/library/%{packname}/libs/biovizBase.so
Commit	Line	Data
	1	%define packname biovizBase
	2
	3	Summary: Basic graphic utilities for visualization of genomic data
	4	Name: R-%{packname}
	5	Version: 1.10.4
	6	Release: 1
	7	License: Artistic 2.0
	8	Group: X11/Applications
	9	Source0: http://www.bioconductor.org/packages/release/bioc/src/contrib/%{packname}_%{version}.tar.gz
	10	# Source0-md5: c9f2652887977e5283bcbb6b9e30b14a
	11	URL: http://www.bioconductor.org/packages/release/bioc/html/biovizBase.html
	12	BuildRequires: R
	13	BuildRequires: R-cran-scales
	14	BuildRequires: R-cran-Hmisc
	15	BuildRequires: R-cran-RColorBrewer
	16	BuildRequires: R-cran-dichromat
	17	BuildRequires: R-GenomicRanges
	18	BuildRequires: R-Biostrings
	19	BuildRequires: R-Rsamtools
	20	BuildRequires: R-GenomicFeatures
	21	BuildRequires: texlive-latex
	22	Requires: R
	23	Requires: R-cran-scales
	24	Requires: R-cran-Hmisc
	25	Requires: R-cran-RColorBrewer
	26	Requires: R-cran-dichromat
	27	Requires: R-GenomicRanges
	28	Requires: R-Biostrings
	29	Requires: R-Rsamtools
	30	Requires: R-GenomicFeatures
	31	BuildRoot: %{tmpdir}/%{name}-%{version}-root-%(id -u -n)
	32
	33	%description
	34	The biovizBase package is designed to provide a set of utilities,
	35	color schemes and conventions for genomic data. It serves as the base
	36	for various high-level packages for biological data visualization.
	37	This saves development effort and encourages consistency.
	38
	39	%prep
	40	%setup -c -q -n %{packname}
	41
	42	%build
	43
	44	%install
	45	rm -rf $RPM_BUILD_ROOT
	46	install -d $RPM_BUILD_ROOT%{_libdir}/R/library
	47
	48	%{_bindir}/R CMD INSTALL %{packname} -l $RPM_BUILD_ROOT%{_libdir}/R/library
	49
	50	%clean
	51	rm -rf $RPM_BUILD_ROOT
	52
	53	%files
	54	%defattr(644,root,root,755)
	55	%dir %{_libdir}/R/library/%{packname}/
	56	%doc %{_libdir}/R/library/%{packname}/doc/
	57	%doc %{_libdir}/R/library/%{packname}/html/
	58	%doc %{_libdir}/R/library/%{packname}/DESCRIPTION
	59	%doc %{_libdir}/R/library/%{packname}/NEWS
	60	%{_libdir}/R/library/%{packname}/NAMESPACE
	61	%{_libdir}/R/library/%{packname}/INDEX
	62	%{_libdir}/R/library/%{packname}/Meta/
	63	%{_libdir}/R/library/%{packname}/R/
	64	%{_libdir}/R/library/%{packname}/help/
	65	%{_libdir}/R/library/%{packname}/data/
	66	%{_libdir}/R/library/%{packname}/examples/
	67	%{_libdir}/R/library/%{packname}/extdata/
	68	%dir %{_libdir}/R/library/%{packname}/libs
	69	%attr(755,root,root) %{_libdir}/R/library/%{packname}/libs/biovizBase.so