- new

diff --git a/R-biomaRt.spec b/R-biomaRt.spec
new file mode 100644 (file)
index 0000000..f901e1d
--- /dev/null
+++ b/R-biomaRt.spec
@@ -0,0 +1,62 @@
+%define                packname        biomaRt
+
+Summary:       R Interface to BioMart databases
+Name:          R-%{packname}
+Version:       2.14.0
+Release:       1
+License:       Artistic 2.0
+Group:         X11/Applications
+Source0:       http://www.bioconductor.org/packages/release/bioc/src/contrib/%{packname}_%{version}.tar.gz
+# Source0-md5: b428114e02b5f8d34ff541e86c7b0fd5
+URL:           http://www.bioconductor.org/packages/release/bioc/html/biomaRt.html
+BuildRequires: R-cran-RCurl
+BuildRequires: R-cran-XML
+BuildRequires: R
+BuildRequires: texlive-latex
+Requires:      R-cran-RCurl
+Requires:      R-cran-XML
+Requires:      R
+BuildRoot:     %{tmpdir}/%{name}-%{version}-root-%(id -u -n)
+
+%description
+In recent years a wealth of biological data has become available in
+public data repositories. Easy access to these valuable data resources
+and firm integration with data analysis is needed for comprehensive
+bioinformatics data analysis. biomaRt provides an interface to a
+growing collection of databases implementing the BioMart software
+suite (http://www.biomart.org). The package enables retrieval of large
+amounts of data in a uniform way without the need to know the
+underlying database schemas or write complex SQL queries. Examples of
+BioMart databases are Ensembl, COSMIC, Uniprot, HGNC, Gramene,
+Wormbase and dbSNP mapped to Ensembl. These major databases give
+biomaRt users direct access to a diverse set of data and enable a wide
+range of powerful online queries from gene annotation to database
+mining.
+
+%prep
+%setup -c -q -n %{packname}
+
+%build
+
+%install
+rm -rf $RPM_BUILD_ROOT
+install -d $RPM_BUILD_ROOT%{_libdir}/R/library
+
+%{_bindir}/R CMD INSTALL %{packname} -l $RPM_BUILD_ROOT%{_libdir}/R/library
+
+%clean
+rm -rf $RPM_BUILD_ROOT
+
+%files
+%defattr(644,root,root,755)
+%dir %{_libdir}/R/library/%{packname}/
+%doc %{_libdir}/R/library/%{packname}/doc/
+%doc %{_libdir}/R/library/%{packname}/html/
+%doc %{_libdir}/R/library/%{packname}/DESCRIPTION
+%doc %{_libdir}/R/library/%{packname}/CITATION
+%{_libdir}/R/library/%{packname}/NAMESPACE
+%{_libdir}/R/library/%{packname}/INDEX
+%{_libdir}/R/library/%{packname}/Meta/
+%{_libdir}/R/library/%{packname}/R/
+%{_libdir}/R/library/%{packname}/help/
+%{_libdir}/R/library/%{packname}/scripts/