R-annaffy.spec

   1 %define         packname        annaffy
   2
   3 Summary:        Annotation tools for Affymetrix biological metadata
   4 Name:           R-%{packname}
   5 Version:        1.34.0
   6 Release:        1
   7 License:        LGPL v2+
   8 Group:          Applications/Engineering
   9 Source0:        http://bioconductor.org/packages/release/bioc/src/contrib/%{packname}_%{version}.tar.gz
  10 # Source0-md5:  886859ce049d7b17b5c728b8016e8f20
  11 URL:            http://bioconductor.org/packages/release/bioc/html/annaffy.html
  12 BuildRequires:  R
  13 BuildRequires:  R-Biobase
  14 BuildRequires:  R-GO.db
  15 BuildRequires:  R-KEGG.db
  16 BuildRequires:  R-AnnotationDbi
  17 BuildRequires:  R-hgu95av2.db
  18 BuildRequires:  R-multtest
  19 BuildRequires:  texlive-latex
  20 BuildRequires:  zlib-devel
  21 Requires:       R
  22 Requires:       R-Biobase
  23 Requires:       R-GO.db
  24 Requires:       R-KEGG.db
  25 Requires:       R-AnnotationDbi
  26 Suggests:       R-hgu95av2.db
  27 Suggests:       R-multtest
  28 BuildRoot:      %{tmpdir}/%{name}-%{version}-root-%(id -u -n)
  29
  30 %description
  31 Functions for handling data from Bioconductor Affymetrix annotation
  32 data packages. Produces compact HTML and text reports including
  33 experimental data and URL links to many online databases. Allows
  34 searching biological metadata using various criteria.
  35
  36 %prep
  37 %setup -q -c -n %{packname}
  38
  39 %build
  40
  41 %install
  42 rm -rf $RPM_BUILD_ROOT
  43 install -d $RPM_BUILD_ROOT%{_libdir}/R/library
  44
  45 R CMD INSTALL %{packname} -l $RPM_BUILD_ROOT%{_libdir}/R/library
  46
  47 %clean
  48 rm -rf $RPM_BUILD_ROOT
  49
  50 %files
  51 %defattr(644,root,root,755)
  52 %dir %{_libdir}/R/library/%{packname}
  53 %doc %{_libdir}/R/library/%{packname}/doc
  54 %doc %{_libdir}/R/library/%{packname}/html
  55 %doc %{_libdir}/R/library/%{packname}/DESCRIPTION
  56 %{_libdir}/R/library/%{packname}/INDEX
  57 %{_libdir}/R/library/%{packname}/NAMESPACE
  58 %{_libdir}/R/library/%{packname}/Meta
  59 %{_libdir}/R/library/%{packname}/R
  60 %{_libdir}/R/library/%{packname}/help
  61 %{_libdir}/R/library/%{packname}/data