R-affyQCReport.spec

   1 %define         packname        affyQCReport
   2
   3 Summary:        QC Report Generation for affyBatch objects
   4 Name:           R-%{packname}
   5 Version:        1.40.0
   6 Release:        1
   7 License:        LGPL v2+
   8 Group:          Applications/Engineering
   9 Source0:        http://bioconductor.org/packages/release/bioc/src/contrib/%{packname}_%{version}.tar.gz
  10 # Source0-md5:  16440fb7fa5920fd36319a5af83eadc7
  11 URL:            http://bioconductor.org/packages/release/bioc/html/affyQCReport.html
  12 BuildRequires:  R
  13 BuildRequires:  R-Biobase
  14 BuildRequires:  R-affy
  15 BuildRequires:  R-affyPLM
  16 BuildRequires:  R-genefilter
  17 BuildRequires:  R-simpleaffy
  18 BuildRequires:  R-cran-RColorBrewer
  19 BuildRequires:  R-cran-xtable
  20 BuildRequires:  texlive-latex
  21 Requires:       R
  22 Requires:       R-Biobase
  23 Requires:       R-affy
  24 Requires:       R-affyPLM
  25 Requires:       R-genefilter
  26 Requires:       R-simpleaffy
  27 Requires:       R-cran-RColorBrewer
  28 Requires:       R-cran-xtable
  29 Suggests:       R-tkWidgets
  30 Suggests:       R-affydata
  31 BuildRoot:      %{tmpdir}/%{name}-%{version}-root-%(id -u -n)
  32
  33 %description
  34 This package creates a QC report for an AffyBatch object.
  35 The report is intended to allow the user to quickly assess the quality
  36 of a set of arrays in an AffyBatch object.
  37
  38 %prep
  39 %setup -q -c -n %{packname}
  40
  41 %build
  42
  43 %install
  44 rm -rf $RPM_BUILD_ROOT
  45 install -d $RPM_BUILD_ROOT%{_libdir}/R/library
  46
  47 R CMD INSTALL %{packname} -l $RPM_BUILD_ROOT%{_libdir}/R/library
  48
  49 %clean
  50 rm -rf $RPM_BUILD_ROOT
  51
  52 %files
  53 %defattr(644,root,root,755)
  54 %dir %{_libdir}/R/library/%{packname}
  55 %doc %{_libdir}/R/library/%{packname}/doc
  56 %doc %{_libdir}/R/library/%{packname}/html
  57 %doc %{_libdir}/R/library/%{packname}/DESCRIPTION
  58 %{_libdir}/R/library/%{packname}/INDEX
  59 %{_libdir}/R/library/%{packname}/NAMESPACE
  60 %{_libdir}/R/library/%{packname}/Meta
  61 %{_libdir}/R/library/%{packname}/R
  62 %{_libdir}/R/library/%{packname}/help
  63 %{_libdir}/R/library/%{packname}/Templates
  64 %{_libdir}/R/library/%{packname}/scripts