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be9c3bd3 JR |
1 | %define packname affyQCReport |
2 | ||
3 | Summary: QC Report Generation for affyBatch objects | |
4 | Name: R-%{packname} | |
1f58dfcb | 5 | Version: 1.40.0 |
be9c3bd3 JR |
6 | Release: 1 |
7 | License: LGPL v2+ | |
8 | Group: Applications/Engineering | |
9 | Source0: http://bioconductor.org/packages/release/bioc/src/contrib/%{packname}_%{version}.tar.gz | |
1f58dfcb JR |
10 | # Source0-md5: 16440fb7fa5920fd36319a5af83eadc7 |
11 | URL: http://bioconductor.org/packages/release/bioc/html/affyQCReport.html | |
be9c3bd3 JR |
12 | BuildRequires: R |
13 | BuildRequires: R-Biobase | |
14 | BuildRequires: R-affy | |
15 | BuildRequires: R-affyPLM | |
16 | BuildRequires: R-genefilter | |
17 | BuildRequires: R-simpleaffy | |
18 | BuildRequires: R-cran-RColorBrewer | |
19 | BuildRequires: R-cran-xtable | |
20 | BuildRequires: texlive-latex | |
21 | Requires: R | |
22 | Requires: R-Biobase | |
23 | Requires: R-affy | |
24 | Requires: R-affyPLM | |
25 | Requires: R-genefilter | |
26 | Requires: R-simpleaffy | |
27 | Requires: R-cran-RColorBrewer | |
28 | Requires: R-cran-xtable | |
29 | Suggests: R-tkWidgets | |
30 | Suggests: R-affydata | |
31 | BuildRoot: %{tmpdir}/%{name}-%{version}-root-%(id -u -n) | |
32 | ||
33 | %description | |
34 | This package creates a QC report for an AffyBatch object. | |
35 | The report is intended to allow the user to quickly assess the quality | |
36 | of a set of arrays in an AffyBatch object. | |
37 | ||
38 | %prep | |
39 | %setup -q -c -n %{packname} | |
40 | ||
41 | %build | |
42 | ||
43 | %install | |
44 | rm -rf $RPM_BUILD_ROOT | |
45 | install -d $RPM_BUILD_ROOT%{_libdir}/R/library | |
46 | ||
47 | R CMD INSTALL %{packname} -l $RPM_BUILD_ROOT%{_libdir}/R/library | |
48 | ||
49 | %clean | |
50 | rm -rf $RPM_BUILD_ROOT | |
51 | ||
52 | %files | |
53 | %defattr(644,root,root,755) | |
54 | %dir %{_libdir}/R/library/%{packname} | |
55 | %doc %{_libdir}/R/library/%{packname}/doc | |
56 | %doc %{_libdir}/R/library/%{packname}/html | |
57 | %doc %{_libdir}/R/library/%{packname}/DESCRIPTION | |
58 | %{_libdir}/R/library/%{packname}/INDEX | |
59 | %{_libdir}/R/library/%{packname}/NAMESPACE | |
60 | %{_libdir}/R/library/%{packname}/Meta | |
61 | %{_libdir}/R/library/%{packname}/R | |
62 | %{_libdir}/R/library/%{packname}/help | |
63 | %{_libdir}/R/library/%{packname}/Templates | |
64 | %{_libdir}/R/library/%{packname}/scripts |