]>
Commit | Line | Data |
---|---|---|
e2ac8a70 JR |
1 | %define packname affy |
2 | ||
3 | Summary: Methods for Affymetrix Oligonucleotide Arrays | |
4 | Name: R-%{packname} | |
ae460a04 | 5 | Version: 1.40.0 |
d2aab04b | 6 | Release: 3 |
e2ac8a70 JR |
7 | License: LGPL v2+ |
8 | Group: Applications/Engineering | |
9 | Source0: http://bioconductor.org/packages/release/bioc/src/contrib/%{packname}_%{version}.tar.gz | |
ae460a04 | 10 | # Source0-md5: b58ebcb0117b685130425e8840088845 |
e2ac8a70 | 11 | Patch0: bogus-deps.patch |
ae460a04 | 12 | URL: http://bioconductor.org/packages/release/bioc/html/affy.html |
e2ac8a70 JR |
13 | BuildRequires: R |
14 | BuildRequires: R-Biobase | |
15 | BuildRequires: R-BiocGenerics | |
16 | BuildRequires: R-affyio | |
17 | BuildRequires: R-preprocessCore-devel | |
18 | BuildRequires: R-tkWidgets | |
19 | BuildRequires: texlive-latex | |
20 | BuildRequires: zlib-devel | |
21 | Requires: R | |
22 | Requires: R-Biobase | |
23 | Requires: R-BiocGenerics | |
24 | Requires: R-affyio | |
25 | Requires: R-preprocessCore | |
26 | Suggests: R-tkWidgets | |
27 | BuildRoot: %{tmpdir}/%{name}-%{version}-root-%(id -u -n) | |
28 | ||
29 | %description | |
30 | The package contains functions for exploratory oligonucleotide array | |
31 | analysis. | |
32 | ||
33 | The dependancy to tkWidgets only concerns few convenience functions. | |
34 | 'affy' is fully functional without it. | |
35 | ||
36 | %prep | |
37 | %setup -q -c -n %{packname} | |
38 | %patch0 -p1 | |
39 | ||
40 | %build | |
41 | ||
42 | %install | |
43 | rm -rf $RPM_BUILD_ROOT | |
44 | install -d $RPM_BUILD_ROOT%{_libdir}/R/library | |
45 | ||
46 | R CMD INSTALL %{packname} -l $RPM_BUILD_ROOT%{_libdir}/R/library | |
47 | ||
48 | %clean | |
49 | rm -rf $RPM_BUILD_ROOT | |
50 | ||
51 | %files | |
52 | %defattr(644,root,root,755) | |
53 | %dir %{_libdir}/R/library/%{packname} | |
54 | %doc %{_libdir}/R/library/%{packname}/doc | |
55 | %doc %{_libdir}/R/library/%{packname}/html | |
56 | %doc %{_libdir}/R/library/%{packname}/DESCRIPTION | |
57 | %doc %{_libdir}/R/library/%{packname}/NEWS | |
58 | %doc %{_libdir}/R/library/%{packname}/CITATION | |
59 | %{_libdir}/R/library/%{packname}/INDEX | |
60 | %{_libdir}/R/library/%{packname}/NAMESPACE | |
61 | %{_libdir}/R/library/%{packname}/Meta | |
62 | %{_libdir}/R/library/%{packname}/R | |
63 | %{_libdir}/R/library/%{packname}/help | |
64 | %{_libdir}/R/library/%{packname}/data | |
65 | %{_libdir}/R/library/%{packname}/libs | |
66 | %{_libdir}/R/library/%{packname}/demo | |
67 | %{_libdir}/R/library/%{packname}/tests |