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86265ea0 JR |
1 | %define packname Biostrings |
2 | ||
3 | Summary: String objects representing biological sequences | |
4 | Name: R-%{packname} | |
716ba8cd | 5 | Version: 2.30.1 |
17deb357 | 6 | Release: 3 |
86265ea0 JR |
7 | License: Artistic 2.0 |
8 | Group: Applications/Engineering | |
9 | Source0: http://bioconductor.org/packages/release/bioc/src/contrib/%{packname}_%{version}.tar.gz | |
716ba8cd | 10 | # Source0-md5: acf4d4047855f20096e751cf5fadbf5e |
86265ea0 JR |
11 | URL: http://bioconductor.org/packages/release/bioc/html/Biostrings.html |
12 | BuildRequires: R | |
13 | BuildRequires: R-Biobase | |
14 | BuildRequires: R-IRanges-devel >= 1.6.6 | |
7366d74a | 15 | BuildRequires: R-XVector-devel |
86265ea0 JR |
16 | BuildRequires: texlive-latex |
17 | Requires: R | |
18 | Requires: R-Biobase | |
19 | Requires: R-IRanges >= 1.6.6 | |
7366d74a | 20 | Requires: R-XVector |
86265ea0 JR |
21 | BuildRoot: %{tmpdir}/%{name}-%{version}-root-%(id -u -n) |
22 | ||
23 | %description | |
24 | Memory efficient string containers, string matching algorithms, and | |
25 | other utilities, for fast manipulation of large biological sequences | |
26 | or set of sequences. | |
27 | ||
28 | %package devel | |
29 | Summary: Development files for %{name} | |
30 | Group: Development/Libraries | |
31 | Requires: %{name} = %{version}-%{release} | |
32 | ||
33 | %description devel | |
34 | The %{name}-devel package contains libraries and header files for | |
35 | developing applications that use %{name}. | |
36 | ||
37 | %prep | |
38 | %setup -q -c -n %{packname} | |
39 | ||
40 | %build | |
41 | ||
42 | %install | |
43 | rm -rf $RPM_BUILD_ROOT | |
44 | install -d $RPM_BUILD_ROOT%{_libdir}/R/library | |
45 | ||
46 | R CMD INSTALL %{packname} -l $RPM_BUILD_ROOT%{_libdir}/R/library | |
47 | ||
48 | %clean | |
49 | rm -rf $RPM_BUILD_ROOT | |
50 | ||
51 | %files | |
52 | %defattr(644,root,root,755) | |
53 | %dir %{_libdir}/R/library/%{packname}/ | |
54 | %doc %{_libdir}/R/library/%{packname}/doc | |
55 | %doc %{_libdir}/R/library/%{packname}/DESCRIPTION | |
56 | %doc %{_libdir}/R/library/%{packname}/html | |
57 | %doc %{_libdir}/R/library/%{packname}/NEWS | |
58 | %{_libdir}/R/library/%{packname}/help | |
59 | %{_libdir}/R/library/%{packname}/R | |
60 | %{_libdir}/R/library/%{packname}/extdata | |
61 | %{_libdir}/R/library/%{packname}/data | |
62 | %{_libdir}/R/library/%{packname}/libs | |
63 | %{_libdir}/R/library/%{packname}/Meta | |
64 | %{_libdir}/R/library/%{packname}/UnitTests | |
65 | %{_libdir}/R/library/%{packname}/INDEX | |
66 | %{_libdir}/R/library/%{packname}/NAMESPACE | |
67 | ||
68 | %files devel | |
69 | %{_libdir}/R/library/%{packname}/include |