R-AnnotationDbi.spec

   1 %define         packname        AnnotationDbi
   2
   3 Summary:        Annotation Database Interface
   4 Name:           R-%{packname}
   5 Version:        1.20.1
   6 Release:        1
   7 License:        Artistic 2.0
   8 Group:          Applications/Engineering
   9 Source0:        http://bioconductor.org/packages/release/bioc/src/contrib/%{packname}_%{version}.tar.gz
  10 # Source0-md5:  71a39e9607d54c8cad77f4595f16897c
  11 URL:            http://bioconductor.org/packages/release/bioc/html/%{packname}.html
  12 BuildRequires:  R-Biobase
  13 BuildRequires:  R-BiocGenerics
  14 BuildRequires:  R-cran-DBI
  15 BuildRequires:  R-IRanges-devel
  16 BuildRequires:  R-cran-RSQLite
  17 BuildRequires:  R
  18 BuildRequires:  texlive-latex
  19 Requires:       R-Biobase
  20 Requires:       R-BiocGenerics
  21 Requires:       R-cran-DBI
  22 Requires:       R-IRanges
  23 Requires:       R-cran-RSQLite
  24 Requires:       R
  25 BuildRoot:      %{tmpdir}/%{name}-%{version}-root-%(id -u -n)
  26
  27 %description
  28 Provides user interface and database connection code for annotation
  29 data packages using SQLite data storage.
  30
  31 %prep
  32 %setup -q -c -n %{packname}
  33
  34 %build
  35
  36 %install
  37 rm -rf $RPM_BUILD_ROOT
  38 install -d $RPM_BUILD_ROOT%{_libdir}/R/library
  39
  40 R CMD INSTALL %{packname} -l $RPM_BUILD_ROOT%{_libdir}/R/library
  41
  42 %clean
  43 rm -rf $RPM_BUILD_ROOT
  44
  45 %files
  46 %defattr(644,root,root,755)
  47 %dir %{_libdir}/R/library/%{packname}
  48 %doc %{_libdir}/R/library/%{packname}/html
  49 %doc %{_libdir}/R/library/%{packname}/DESCRIPTION
  50 %doc %{_libdir}/R/library/%{packname}/doc
  51 %doc %{_libdir}/R/library/%{packname}/NEWS
  52 %doc %{_libdir}/R/library/%{packname}/TODO
  53 %{_libdir}/R/library/%{packname}/INDEX
  54 %{_libdir}/R/library/%{packname}/NAMESPACE
  55 %{_libdir}/R/library/%{packname}/Meta
  56 %{_libdir}/R/library/%{packname}/R
  57 %{_libdir}/R/library/%{packname}/help
  58 %{_libdir}/R/library/%{packname}/DBschemas
  59 %{_libdir}/R/library/%{packname}/extdata
  60 %{_libdir}/R/library/%{packname}/NOTES-Herve
  61 %{_libdir}/R/library/%{packname}/unitTests