1 %define packname AnnotationDbi
3 Summary: Annotation Database Interface
8 Group: Applications/Engineering
9 Source0: http://bioconductor.org/packages/release/bioc/src/contrib/%{packname}_%{version}.tar.gz
10 # Source0-md5: a51f84efd8fff2f48579189ebc67c508
11 URL: http://bioconductor.org/packages/release/bioc/html/AnnotationDbi.html
12 BuildRequires: R-Biobase
13 BuildRequires: R-BiocGenerics
14 BuildRequires: R-cran-DBI
15 BuildRequires: R-IRanges-devel
16 BuildRequires: R-cran-RSQLite
18 BuildRequires: texlive-latex
20 Requires: R-BiocGenerics
23 Requires: R-cran-RSQLite
25 BuildRoot: %{tmpdir}/%{name}-%{version}-root-%(id -u -n)
28 Provides user interface and database connection code for annotation
29 data packages using SQLite data storage.
32 %setup -q -c -n %{packname}
37 rm -rf $RPM_BUILD_ROOT
38 install -d $RPM_BUILD_ROOT%{_libdir}/R/library
40 R CMD INSTALL %{packname} -l $RPM_BUILD_ROOT%{_libdir}/R/library
43 rm -rf $RPM_BUILD_ROOT
46 %defattr(644,root,root,755)
47 %dir %{_libdir}/R/library/%{packname}
48 %doc %{_libdir}/R/library/%{packname}/html
49 %doc %{_libdir}/R/library/%{packname}/DESCRIPTION
50 %doc %{_libdir}/R/library/%{packname}/doc
51 %doc %{_libdir}/R/library/%{packname}/NEWS
52 %doc %{_libdir}/R/library/%{packname}/TODO
53 %{_libdir}/R/library/%{packname}/INDEX
54 %{_libdir}/R/library/%{packname}/NAMESPACE
55 %{_libdir}/R/library/%{packname}/Meta
56 %{_libdir}/R/library/%{packname}/R
57 %{_libdir}/R/library/%{packname}/help
58 %{_libdir}/R/library/%{packname}/DBschemas
59 %{_libdir}/R/library/%{packname}/extdata
60 %{_libdir}/R/library/%{packname}/NOTES-Herve
61 %{_libdir}/R/library/%{packname}/unitTests